Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978239

Identifier: 156978239

GI number: 156978239

Start: 2118866

End: 2119333

Strand: Direct

Name: 156978239

Synonym: VIBHAR_07045

Alternate gene names: NA

Gene position: 2118866-2119333 (Clockwise)

Preceding gene: 156978238

Following gene: 156978243

Centisome position: 96.14

GC content: 46.15

Gene sequence:

>468_bases
ATGGATTTGATGACCTGGCAAGATCAACTATCAGATTGGTACGACAATCGGAAGCATGATCAAGTAGAAAGCTTAGAAGC
GATCTTATACCAAGCGCCTGTTGCTGTGTTTGGTCCAGAGTTGACGGACGAACAGAGTAAAGCGATCGCTTGTTGGTTAG
ATGGCTGCCTAAGAGTCTTTCAACATGCTAGGCATCATGACCATCAAAAAGCCTTTCAAACCCTCCAATACACCGGTGCG
AAACTCGAACAAGCGGCTTGCCAGCCGATGACCGATATTCTTATCAAGGATTGGTGCCTCAAACGTTTGCAGCATTTGAC
CGTTCTGGCGCTAGAGTTCTGCAATCAGCAACACGATCAAAATGAGTGGCAGCAGCAGGCGAGCAACTTGATCGAGTCAC
ACGTTGCATTGATGCGATCGTTAAATTGGAATGAAACCAGGAAGCATGATCAAGGATTACGTCATTAA

Upstream 100 bases:

>100_bases
TAGATGCCGATGAGATCCGCAGTCGCAGTAGCGTTGTGGTCGAAGACTATGATCAAATCGGACCAAATCACTTTGTAAAA
CAATGGACTGAGGCAGCCTA

Downstream 100 bases:

>100_bases
TCCGGAAAGATGATCAAGGTTGCTTGATGGTTCCGAATGAATTTGCGAATGCACAAGACAGGAATTTTAGATAAAAAAAA
GCGAGTTTCTTGAGGAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDLMTWQDQLSDWYDNRKHDQVESLEAILYQAPVAVFGPELTDEQSKAIACWLDGCLRVFQHARHHDHQKAFQTLQYTGA
KLEQAACQPMTDILIKDWCLKRLQHLTVLALEFCNQQHDQNEWQQQASNLIESHVALMRSLNWNETRKHDQGLRH

Sequences:

>Translated_155_residues
MDLMTWQDQLSDWYDNRKHDQVESLEAILYQAPVAVFGPELTDEQSKAIACWLDGCLRVFQHARHHDHQKAFQTLQYTGA
KLEQAACQPMTDILIKDWCLKRLQHLTVLALEFCNQQHDQNEWQQQASNLIESHVALMRSLNWNETRKHDQGLRH
>Mature_155_residues
MDLMTWQDQLSDWYDNRKHDQVESLEAILYQAPVAVFGPELTDEQSKAIACWLDGCLRVFQHARHHDHQKAFQTLQYTGA
KLEQAACQPMTDILIKDWCLKRLQHLTVLALEFCNQQHDQNEWQQQASNLIESHVALMRSLNWNETRKHDQGLRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18263; Mature: 18263

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLMTWQDQLSDWYDNRKHDQVESLEAILYQAPVAVFGPELTDEQSKAIACWLDGCLRVF
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
QHARHHDHQKAFQTLQYTGAKLEQAACQPMTDILIKDWCLKRLQHLTVLALEFCNQQHDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
NEWQQQASNLIESHVALMRSLNWNETRKHDQGLRH
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure
MDLMTWQDQLSDWYDNRKHDQVESLEAILYQAPVAVFGPELTDEQSKAIACWLDGCLRVF
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
QHARHHDHQKAFQTLQYTGAKLEQAACQPMTDILIKDWCLKRLQHLTVLALEFCNQQHDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
NEWQQQASNLIESHVALMRSLNWNETRKHDQGLRH
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA