Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978234

Identifier: 156978234

GI number: 156978234

Start: 2114440

End: 2115195

Strand: Direct

Name: 156978234

Synonym: VIBHAR_07039

Alternate gene names: NA

Gene position: 2114440-2115195 (Clockwise)

Preceding gene: 156978229

Following gene: 156978238

Centisome position: 95.94

GC content: 43.78

Gene sequence:

>756_bases
ATGAAAGGACTGTTACGAACATTAGGCTTTAGTTTTATAGCCTTAAGCTCTTACGCTATGGCAAGTGAAGTGAATTATTA
CGTGATAGCTGATCAAGCCAGACCATTTCAAATTGAGCAGCAAGGTGAACAGCATTCAGGAATTGTGACAGACATTGTTA
GTGCTATCTTTGCCGAATCCGATTATGAAGTGAAATACCACACCTACCCATTCAAGCGCATGATTTCGGTACTCGAAGCG
GGGGGAGAAGAAAATTGGGTCACTTACGGCAGTCCAAAGTGGGGGAAGGTTCAATCGGAAAATCTCTCAGAACAACCTAT
TTACACTGTAAAACACGTATTAGTATCGAGCAGTAAAGCACCATTCAAATTCAGCGATATGCAGCACATGCAAGGTCGTT
CAATTGTGCTTCTGCTTGGCTTTGATTACCCGAATCTCAGCCCTTTCTTTGAAAATGGTACCGTCAATGAAATGCGCGTC
AAAGATTACGAGGCCGCCTATCGCGTTTTACAACGAACCCCTGGCGATACCGTTTTTGTCGAAATGGAATCACGCGTCGT
TTACAACATTCATCGTTTAGGACTGCCGATGGGCGACTTCCAAATTCAATCTTTCAGCGCAGTGATACCAGACTACGCCA
TCTATCTCGCTTTCTCCCCTAAGATGAACCCCAAAGTGCAGAGCTTTATCAATAAACGCCTAGCAGTACTCAAAAGCTCC
GGAGAACTCGACGACATCATCAAAAAATATATCTAG

Upstream 100 bases:

>100_bases
AATCGGCGCTGAGCTCGCTCTTTTATCTCCATATGAAATCGCTCCCTTAAACTTGCGCTAATATAAATATAGTCAGGTCG
CGACAATAATCGAGGTTAGG

Downstream 100 bases:

>100_bases
CTAGCCGCTTACGCCCAAACTGTAACAAAAACCGCCAGCATCGATTAGCTGGCGATTTGATTTTTATATCGTCTCTGCGA
TTAATCTTGTTAGAGTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Amino Acid Transport/Signal Transduction System

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKGLLRTLGFSFIALSSYAMASEVNYYVIADQARPFQIEQQGEQHSGIVTDIVSAIFAESDYEVKYHTYPFKRMISVLEA
GGEENWVTYGSPKWGKVQSENLSEQPIYTVKHVLVSSSKAPFKFSDMQHMQGRSIVLLLGFDYPNLSPFFENGTVNEMRV
KDYEAAYRVLQRTPGDTVFVEMESRVVYNIHRLGLPMGDFQIQSFSAVIPDYAIYLAFSPKMNPKVQSFINKRLAVLKSS
GELDDIIKKYI

Sequences:

>Translated_251_residues
MKGLLRTLGFSFIALSSYAMASEVNYYVIADQARPFQIEQQGEQHSGIVTDIVSAIFAESDYEVKYHTYPFKRMISVLEA
GGEENWVTYGSPKWGKVQSENLSEQPIYTVKHVLVSSSKAPFKFSDMQHMQGRSIVLLLGFDYPNLSPFFENGTVNEMRV
KDYEAAYRVLQRTPGDTVFVEMESRVVYNIHRLGLPMGDFQIQSFSAVIPDYAIYLAFSPKMNPKVQSFINKRLAVLKSS
GELDDIIKKYI
>Mature_251_residues
MKGLLRTLGFSFIALSSYAMASEVNYYVIADQARPFQIEQQGEQHSGIVTDIVSAIFAESDYEVKYHTYPFKRMISVLEA
GGEENWVTYGSPKWGKVQSENLSEQPIYTVKHVLVSSSKAPFKFSDMQHMQGRSIVLLLGFDYPNLSPFFENGTVNEMRV
KDYEAAYRVLQRTPGDTVFVEMESRVVYNIHRLGLPMGDFQIQSFSAVIPDYAIYLAFSPKMNPKVQSFINKRLAVLKSS
GELDDIIKKYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28549; Mature: 28549

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLLRTLGFSFIALSSYAMASEVNYYVIADQARPFQIEQQGEQHSGIVTDIVSAIFAES
CCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEHHCCCCCCCCHHHHHHHHHHCCC
DYEVKYHTYPFKRMISVLEAGGEENWVTYGSPKWGKVQSENLSEQPIYTVKHVLVSSSKA
CCEEEEEECCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PFKFSDMQHMQGRSIVLLLGFDYPNLSPFFENGTVNEMRVKDYEAAYRVLQRTPGDTVFV
CEEECCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEE
EMESRVVYNIHRLGLPMGDFQIQSFSAVIPDYAIYLAFSPKMNPKVQSFINKRLAVLKSS
EECCCEEEEHHHHCCCCCCEEHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCC
GELDDIIKKYI
CCHHHHHHHCC
>Mature Secondary Structure
MKGLLRTLGFSFIALSSYAMASEVNYYVIADQARPFQIEQQGEQHSGIVTDIVSAIFAES
CCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEHHCCCCCCCCHHHHHHHHHHCCC
DYEVKYHTYPFKRMISVLEAGGEENWVTYGSPKWGKVQSENLSEQPIYTVKHVLVSSSKA
CCEEEEEECCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PFKFSDMQHMQGRSIVLLLGFDYPNLSPFFENGTVNEMRVKDYEAAYRVLQRTPGDTVFV
CEEECCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEE
EMESRVVYNIHRLGLPMGDFQIQSFSAVIPDYAIYLAFSPKMNPKVQSFINKRLAVLKSS
EECCCEEEEHHHHCCCCCCEEHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCC
GELDDIIKKYI
CCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA