Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156978117

Identifier: 156978117

GI number: 156978117

Start: 2019066

End: 2019578

Strand: Reverse

Name: 156978117

Synonym: VIBHAR_06922

Alternate gene names: NA

Gene position: 2019578-2019066 (Counterclockwise)

Preceding gene: 156978118

Following gene: 156978116

Centisome position: 91.63

GC content: 44.44

Gene sequence:

>513_bases
ATGCGCTTTGAATACATACTTGATGATGCAGTCACCCCAGCTCTCGATGCAAAGCTAAGGCATTTGCTTTCTACTTGCTT
TACCAAAGAGCAAGATAAAATCTTTCAGACTCAACGATACTTCCGTGAAATGCCACGACATCGCTACCTTATTTGGGATG
GCGAAATCCTTGCAGCGCATATTGCTGCGCACGAGAAGCAAGTGATGATAGATGATCAATCTTTTCCCATTAGCGGTATT
GCGGAAGTCTGTGTACAGCCTAACTTTCGTGGGAAAGGACTGGTGAAAACATTGCTCAATTCGGTGCATCAGGATGCTAT
AGAGCGAGGAGATGCCTTTTCCATATTATTTGGGCGAACGCACGTCTATCAGTCCAGCGGTTATCAGCCGACAGATAACT
TGCACATGGAAATTCAACCCAATCAATGGGCTAGTATCAGTGATGCTATGGTACGTTCTCTGAATATCACTTGGCCGCAG
CAAGTTGTACATTTAGTCGGCTATCCTTTTTAA

Upstream 100 bases:

>100_bases
AAAGCGCAGCTCAGTCTGCGCTTTTTTTATTTGCGCTGTATCCCAGTAAGTGGTTTTTCAAAGGTTTACTTTTAATCATG
GGAAATCAATGAGGTCAATC

Downstream 100 bases:

>100_bases
ACAGGTTTTCTCTGCATTTAACTTTGTGTGAGAATACGCATACATAGAATTCCACAGGAACCACATTCATGGCGAATTGG
GAAGGCGTGAGCGAATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRFEYILDDAVTPALDAKLRHLLSTCFTKEQDKIFQTQRYFREMPRHRYLIWDGEILAAHIAAHEKQVMIDDQSFPISGI
AEVCVQPNFRGKGLVKTLLNSVHQDAIERGDAFSILFGRTHVYQSSGYQPTDNLHMEIQPNQWASISDAMVRSLNITWPQ
QVVHLVGYPF

Sequences:

>Translated_170_residues
MRFEYILDDAVTPALDAKLRHLLSTCFTKEQDKIFQTQRYFREMPRHRYLIWDGEILAAHIAAHEKQVMIDDQSFPISGI
AEVCVQPNFRGKGLVKTLLNSVHQDAIERGDAFSILFGRTHVYQSSGYQPTDNLHMEIQPNQWASISDAMVRSLNITWPQ
QVVHLVGYPF
>Mature_170_residues
MRFEYILDDAVTPALDAKLRHLLSTCFTKEQDKIFQTQRYFREMPRHRYLIWDGEILAAHIAAHEKQVMIDDQSFPISGI
AEVCVQPNFRGKGLVKTLLNSVHQDAIERGDAFSILFGRTHVYQSSGYQPTDNLHMEIQPNQWASISDAMVRSLNITWPQ
QVVHLVGYPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19618; Mature: 19618

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFEYILDDAVTPALDAKLRHLLSTCFTKEQDKIFQTQRYFREMPRHRYLIWDGEILAAH
CCCCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
IAAHEKQVMIDDQSFPISGIAEVCVQPNFRGKGLVKTLLNSVHQDAIERGDAFSILFGRT
HHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHH
HVYQSSGYQPTDNLHMEIQPNQWASISDAMVRSLNITWPQQVVHLVGYPF
EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MRFEYILDDAVTPALDAKLRHLLSTCFTKEQDKIFQTQRYFREMPRHRYLIWDGEILAAH
CCCCEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
IAAHEKQVMIDDQSFPISGIAEVCVQPNFRGKGLVKTLLNSVHQDAIERGDAFSILFGRT
HHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHH
HVYQSSGYQPTDNLHMEIQPNQWASISDAMVRSLNITWPQQVVHLVGYPF
EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA