| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978113
Identifier: 156978113
GI number: 156978113
Start: 2015512
End: 2016501
Strand: Direct
Name: 156978113
Synonym: VIBHAR_06918
Alternate gene names: NA
Gene position: 2015512-2016501 (Clockwise)
Preceding gene: 156978112
Following gene: 156978114
Centisome position: 91.45
GC content: 36.77
Gene sequence:
>990_bases ATGTTTAACATAAAAGCACCAATGATAAGAAGTGCACTATTTTTTACCCTATCGATTGTTATCACAGATATGTTGCATTT AGGAATGCCAGTATTTAGTGTTTTTTTAGGTCCAGCTTTGATTTTACGAGATAAATTTAGCTTGAACAAATCATTAGTGT TCATATCTTTAATTAGTATCTATTTTATTTCAGGTTCCTTGGCTGCGACAATACTCGATCATAACCAGTGGGCGTTAATA GTGAGCTCGATTTTCGTAATATATAGCTATTTGCGAATTGAAAAACTTGCTTCATTTTCAACGGCGCCGGTATTTTTATA TTGTTATGGACTTATCAATACAACATATGGAACTTCGATGGAGTTGTATTTTTATCAACTTCTACATGTAGCGTTCATGA TGCTACTACTAGCAAAAGCTATTTTTTGGATTTTGCCGACTCCTTCTAACCAAATGTCATCTAAACAAAATCAAAAAGTC GTCAAGCGTTCTAAGGCTCTGAATGTGATATCCACAATCATCATATCTCTATCCTTGGTTTACTTTCTATCGATTGAAGT TGGCAAGGCCATATTCTGCCTTTCAGTAATCATAAGTATTGTTTGTAGACCAGATTATGCTTCGATCATAAAAGGCCTAA AAAGTATCTTACCGCTGCAGGTATCCGGCTGTTTCATTGCGCTAATATTACATATACTTGTGGCTGGTCATGGTCAAAAT ATACTAATGCTATCGCTAGTGATATTTGGCTTCTCTATTGTTGTATTTTACTTTGCGCATAGTTCGGAGAAAGTCTCTAA GAAGATACCAAACTTTGAAATTGGACTCCTGGCAGCGACGCTGACACCGTTTACGCTTTATACTCATTCAACTGGATTTG ATATTGGTCCATTTATTCGACGAGCTACGAATATGGGCGTTATTTGGGGGTTGGGTACGCTCATGATTGTGCTGCTGCCA TGGTGTCTATCGTGGTTCAAGCGTATTTAA
Upstream 100 bases:
>100_bases GGTAGTTCGTGACGATAGCAAATACTGGAATTCATTTTCATATATGACGATGCATATTATTGCGTTGTTTCGTTACCTAT ACTAATGAAAGATATACCTT
Downstream 100 bases:
>100_bases ATAAATTACTCTAAGGATCAGGTATTTTGTAGAAGGGTAAGACTTTGTTGCGCAATTCAATAGAACTCAATCCAGAACCT ACGACCTGCTCCGCTACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MFNIKAPMIRSALFFTLSIVITDMLHLGMPVFSVFLGPALILRDKFSLNKSLVFISLISIYFISGSLAATILDHNQWALI VSSIFVIYSYLRIEKLASFSTAPVFLYCYGLINTTYGTSMELYFYQLLHVAFMMLLLAKAIFWILPTPSNQMSSKQNQKV VKRSKALNVISTIIISLSLVYFLSIEVGKAIFCLSVIISIVCRPDYASIIKGLKSILPLQVSGCFIALILHILVAGHGQN ILMLSLVIFGFSIVVFYFAHSSEKVSKKIPNFEIGLLAATLTPFTLYTHSTGFDIGPFIRRATNMGVIWGLGTLMIVLLP WCLSWFKRI
Sequences:
>Translated_329_residues MFNIKAPMIRSALFFTLSIVITDMLHLGMPVFSVFLGPALILRDKFSLNKSLVFISLISIYFISGSLAATILDHNQWALI VSSIFVIYSYLRIEKLASFSTAPVFLYCYGLINTTYGTSMELYFYQLLHVAFMMLLLAKAIFWILPTPSNQMSSKQNQKV VKRSKALNVISTIIISLSLVYFLSIEVGKAIFCLSVIISIVCRPDYASIIKGLKSILPLQVSGCFIALILHILVAGHGQN ILMLSLVIFGFSIVVFYFAHSSEKVSKKIPNFEIGLLAATLTPFTLYTHSTGFDIGPFIRRATNMGVIWGLGTLMIVLLP WCLSWFKRI >Mature_329_residues MFNIKAPMIRSALFFTLSIVITDMLHLGMPVFSVFLGPALILRDKFSLNKSLVFISLISIYFISGSLAATILDHNQWALI VSSIFVIYSYLRIEKLASFSTAPVFLYCYGLINTTYGTSMELYFYQLLHVAFMMLLLAKAIFWILPTPSNQMSSKQNQKV VKRSKALNVISTIIISLSLVYFLSIEVGKAIFCLSVIISIVCRPDYASIIKGLKSILPLQVSGCFIALILHILVAGHGQN ILMLSLVIFGFSIVVFYFAHSSEKVSKKIPNFEIGLLAATLTPFTLYTHSTGFDIGPFIRRATNMGVIWGLGTLMIVLLP WCLSWFKRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36786; Mature: 36786
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNIKAPMIRSALFFTLSIVITDMLHLGMPVFSVFLGPALILRDKFSLNKSLVFISLISI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHH YFISGSLAATILDHNQWALIVSSIFVIYSYLRIEKLASFSTAPVFLYCYGLINTTYGTSM HHHCCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH ELYFYQLLHVAFMMLLLAKAIFWILPTPSNQMSSKQNQKVVKRSKALNVISTIIISLSLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFLSIEVGKAIFCLSVIISIVCRPDYASIIKGLKSILPLQVSGCFIALILHILVAGHGQN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCH ILMLSLVIFGFSIVVFYFAHSSEKVSKKIPNFEIGLLAATLTPFTLYTHSTGFDIGPFIR HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHH RATNMGVIWGLGTLMIVLLPWCLSWFKRI HHHCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFNIKAPMIRSALFFTLSIVITDMLHLGMPVFSVFLGPALILRDKFSLNKSLVFISLISI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHH YFISGSLAATILDHNQWALIVSSIFVIYSYLRIEKLASFSTAPVFLYCYGLINTTYGTSM HHHCCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH ELYFYQLLHVAFMMLLLAKAIFWILPTPSNQMSSKQNQKVVKRSKALNVISTIIISLSLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFLSIEVGKAIFCLSVIISIVCRPDYASIIKGLKSILPLQVSGCFIALILHILVAGHGQN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCH ILMLSLVIFGFSIVVFYFAHSSEKVSKKIPNFEIGLLAATLTPFTLYTHSTGFDIGPFIR HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHH RATNMGVIWGLGTLMIVLLPWCLSWFKRI HHHCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA