Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978070

Identifier: 156978070

GI number: 156978070

Start: 1980736

End: 1982001

Strand: Direct

Name: 156978070

Synonym: VIBHAR_06874

Alternate gene names: NA

Gene position: 1980736-1982001 (Clockwise)

Preceding gene: 156978068

Following gene: 156978071

Centisome position: 89.87

GC content: 47.63

Gene sequence:

>1266_bases
ATGGTGAAGTCGCTTATGAACAAGGTCGTATTAGTATTTGGTGGACTTGGGAACGCTGAATCGTCTGTGGTGGGTTTATA
TGAAAGCCTTCTGCACACCCTAAGCTCTCGCTTTGATATCGTCGCTATCGATCCTGCAGTTCAACATCCCAAGTCCTTTG
TATCTCAGTTCCAATTCCCTTACTCCGCTTGCTACGCCAATCTTACTGCGTTTTTGCAGGTTCACTCACATACTGATGTT
GCTGCGGCCTTCGTTCTCACGCCAGTTGGCACACATCTCTCCATCATTGAACAAGTGAGTAATGCTCTCGACACTCAAGA
CCTTCTGTTTGTGGTTGAGAAACCGTCTTTCTCACTGGCTGAAATAGATAGAGGCTTTAACCAAGTCATCCCTGAGCTTA
AACGTCGCGGGGCACTATTTTACTTTATCGATACGGCTTTGGTTGCTCCTTCGCTTGAAGCGCTTTTTGCTGACTCACCT
ATCACACTGCCTGACGGAGTGCCCAATAAGATCATTGCGATTGCTGCCGATAACCCCATCGACAGTCATGAAGCAATCCA
AGGCTTCCGTTTTGAAAACCGAATTGAATTACTCAACGCGAGAAAACTACTTAACTTAACCACCAGCGGCGGCGGAGGTT
ACGGCTTTGATATGGGCATCCACGCAATTGCAGGGCTGGTGCGTTACCTGCATAAATCCAGCATAGGTGACTCGCTGGTT
GAACTAAAACAAATCTGTGCCGAACGGATTAGTGAATCGCAATTGGAGTACACACAAGGCGCTGACACTCATCTTTATGT
CGAAGGCGAACTTGCTTCACTGGAGGGCAACATTGAAGTAGTGATTGAGGCAGGAAAAGCGGGGGATATCTGGGACAGAC
GGTTAGAGCTGCACTATCCGAAGCGCGTCATCGCCATTGGTTTTGGCACACTCAAACATCCCCCGTATCTGTGGGAGAAA
AGCCCCGATGAGATCAAGAGCACCACATTTGATGTTTCAGGCTCAGGTTATGCAATGCACTTTAACGACATCCTCTGCGC
GCTTGGTTTTGATGCTAAACCGCGACTCTCACAGCAAGAGAGCGAAGTCTTGATGTCACAATCGATGAACTTGCTAAGCA
GCGTCTTTGACGCCATCGGCGATACCCACCAAGCTCGCGAACAAAACATTGTCGTAGTGGATGCACACACACCTAAATAC
TTATCAGAAGCAGAGTTAGAGATCAGGAAAGAACTTAGCCAATACCTCGACCTTTTGATTCTTTGA

Upstream 100 bases:

>100_bases
CGAAGTTGCATTTACGAAAACAAAATGTGGGGCTATTGATTGGTAAAAAGTAGCTAGTCTGCCAATAAAATTTGCTAGTC
TGTCATGGTGAATTGTGTGG

Downstream 100 bases:

>100_bases
TTAAAGACCCTCCCTGTATTTCTGACTTAACTCATTTCAATTAAGTGATATAGTTTCGATTCATAAGCCTCAACTCGTAA
GTTGACTGATAGGAATATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MVKSLMNKVVLVFGGLGNAESSVVGLYESLLHTLSSRFDIVAIDPAVQHPKSFVSQFQFPYSACYANLTAFLQVHSHTDV
AAAFVLTPVGTHLSIIEQVSNALDTQDLLFVVEKPSFSLAEIDRGFNQVIPELKRRGALFYFIDTALVAPSLEALFADSP
ITLPDGVPNKIIAIAADNPIDSHEAIQGFRFENRIELLNARKLLNLTTSGGGGYGFDMGIHAIAGLVRYLHKSSIGDSLV
ELKQICAERISESQLEYTQGADTHLYVEGELASLEGNIEVVIEAGKAGDIWDRRLELHYPKRVIAIGFGTLKHPPYLWEK
SPDEIKSTTFDVSGSGYAMHFNDILCALGFDAKPRLSQQESEVLMSQSMNLLSSVFDAIGDTHQAREQNIVVVDAHTPKY
LSEAELEIRKELSQYLDLLIL

Sequences:

>Translated_421_residues
MVKSLMNKVVLVFGGLGNAESSVVGLYESLLHTLSSRFDIVAIDPAVQHPKSFVSQFQFPYSACYANLTAFLQVHSHTDV
AAAFVLTPVGTHLSIIEQVSNALDTQDLLFVVEKPSFSLAEIDRGFNQVIPELKRRGALFYFIDTALVAPSLEALFADSP
ITLPDGVPNKIIAIAADNPIDSHEAIQGFRFENRIELLNARKLLNLTTSGGGGYGFDMGIHAIAGLVRYLHKSSIGDSLV
ELKQICAERISESQLEYTQGADTHLYVEGELASLEGNIEVVIEAGKAGDIWDRRLELHYPKRVIAIGFGTLKHPPYLWEK
SPDEIKSTTFDVSGSGYAMHFNDILCALGFDAKPRLSQQESEVLMSQSMNLLSSVFDAIGDTHQAREQNIVVVDAHTPKY
LSEAELEIRKELSQYLDLLIL
>Mature_421_residues
MVKSLMNKVVLVFGGLGNAESSVVGLYESLLHTLSSRFDIVAIDPAVQHPKSFVSQFQFPYSACYANLTAFLQVHSHTDV
AAAFVLTPVGTHLSIIEQVSNALDTQDLLFVVEKPSFSLAEIDRGFNQVIPELKRRGALFYFIDTALVAPSLEALFADSP
ITLPDGVPNKIIAIAADNPIDSHEAIQGFRFENRIELLNARKLLNLTTSGGGGYGFDMGIHAIAGLVRYLHKSSIGDSLV
ELKQICAERISESQLEYTQGADTHLYVEGELASLEGNIEVVIEAGKAGDIWDRRLELHYPKRVIAIGFGTLKHPPYLWEK
SPDEIKSTTFDVSGSGYAMHFNDILCALGFDAKPRLSQQESEVLMSQSMNLLSSVFDAIGDTHQAREQNIVVVDAHTPKY
LSEAELEIRKELSQYLDLLIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46323; Mature: 46323

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSLMNKVVLVFGGLGNAESSVVGLYESLLHTLSSRFDIVAIDPAVQHPKSFVSQFQFP
CHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHCHHHHHHHHCCC
YSACYANLTAFLQVHSHTDVAAAFVLTPVGTHLSIIEQVSNALDTQDLLFVVEKPSFSLA
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
EIDRGFNQVIPELKRRGALFYFIDTALVAPSLEALFADSPITLPDGVPNKIIAIAADNPI
HHHCCHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCC
DSHEAIQGFRFENRIELLNARKLLNLTTSGGGGYGFDMGIHAIAGLVRYLHKSSIGDSLV
CCHHHHHCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
ELKQICAERISESQLEYTQGADTHLYVEGELASLEGNIEVVIEAGKAGDIWDRRLELHYP
HHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEECCCCEEEEEECCCCCCHHHHHEEECCC
KRVIAIGFGTLKHPPYLWEKSPDEIKSTTFDVSGSGYAMHFNDILCALGFDAKPRLSQQE
CEEEEEECCCCCCCCCCCCCCHHHHHHCEEEECCCCEEEEHHHHHHCCCCCCCCCCCHHH
SEVLMSQSMNLLSSVFDAIGDTHQAREQNIVVVDAHTPKYLSEAELEIRKELSQYLDLLI
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
L
C
>Mature Secondary Structure
MVKSLMNKVVLVFGGLGNAESSVVGLYESLLHTLSSRFDIVAIDPAVQHPKSFVSQFQFP
CHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHCHHHHHHHHCCC
YSACYANLTAFLQVHSHTDVAAAFVLTPVGTHLSIIEQVSNALDTQDLLFVVEKPSFSLA
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
EIDRGFNQVIPELKRRGALFYFIDTALVAPSLEALFADSPITLPDGVPNKIIAIAADNPI
HHHCCHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCC
DSHEAIQGFRFENRIELLNARKLLNLTTSGGGGYGFDMGIHAIAGLVRYLHKSSIGDSLV
CCHHHHHCCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
ELKQICAERISESQLEYTQGADTHLYVEGELASLEGNIEVVIEAGKAGDIWDRRLELHYP
HHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEECCCCEEEEEECCCCCCHHHHHEEECCC
KRVIAIGFGTLKHPPYLWEKSPDEIKSTTFDVSGSGYAMHFNDILCALGFDAKPRLSQQE
CEEEEEECCCCCCCCCCCCCCHHHHHHCEEEECCCCEEEEHHHHHHCCCCCCCCCCCHHH
SEVLMSQSMNLLSSVFDAIGDTHQAREQNIVVVDAHTPKYLSEAELEIRKELSQYLDLLI
HHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA