| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978063
Identifier: 156978063
GI number: 156978063
Start: 1974929
End: 1975324
Strand: Reverse
Name: 156978063
Synonym: VIBHAR_06867
Alternate gene names: NA
Gene position: 1975324-1974929 (Counterclockwise)
Preceding gene: 156978069
Following gene: 156978060
Centisome position: 89.62
GC content: 44.44
Gene sequence:
>396_bases GTGGTGCTGAAAGTAAGGAAAATAGTAATGAAAACAAGAATAACAGTGGGCTTAATGGGGTTAACATTAGCAGGATGCTC AACGACGCCGCCAACCAATGACCAAGTGCAGATCATAGAAAAAAACTGCGCTGTGATACTGAGTGAAGCTGCAAACTCAG AACAGCGTCAGAATGCTTACAACCAGTTAATCGAAAGCTATGGCGAGCGTTATGTGGATGCCAACAATCGAAAACAGTCG ACAAGCTGGGACTTGTTTCGCCAAAACGTCATTCATGATGGGAATGGTCAGTTAACCCGAGAATTTATCGAAGTAAGTGA CTGGGGCTGTGCGAATGGCAATTATCTAGAAGAGGTGCATCTGTTTGTAGAGGAAGCGCAAACCTCTGGTCTGTAA
Upstream 100 bases:
>100_bases AATTTACCGCACTTTTTACATGTGCAGGCGTCAGTCACAAAATCTTTCCGTTTTTGATTAGAAATCGTGGAGTGCAGTTT ATAAAGTTCGGTCTTTCGCA
Downstream 100 bases:
>100_bases TGAATAAGCCGAGCGATGGCTCACTCGGCTAAAAGGTTGTGGTCTTGTTGACGCGTATCCTAGAGATTATTCCTCAGGGT ATTCGCCCATACCCTGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MVLKVRKIVMKTRITVGLMGLTLAGCSTTPPTNDQVQIIEKNCAVILSEAANSEQRQNAYNQLIESYGERYVDANNRKQS TSWDLFRQNVIHDGNGQLTREFIEVSDWGCANGNYLEEVHLFVEEAQTSGL
Sequences:
>Translated_131_residues MVLKVRKIVMKTRITVGLMGLTLAGCSTTPPTNDQVQIIEKNCAVILSEAANSEQRQNAYNQLIESYGERYVDANNRKQS TSWDLFRQNVIHDGNGQLTREFIEVSDWGCANGNYLEEVHLFVEEAQTSGL >Mature_131_residues MVLKVRKIVMKTRITVGLMGLTLAGCSTTPPTNDQVQIIEKNCAVILSEAANSEQRQNAYNQLIESYGERYVDANNRKQS TSWDLFRQNVIHDGNGQLTREFIEVSDWGCANGNYLEEVHLFVEEAQTSGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14724; Mature: 14724
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLKVRKIVMKTRITVGLMGLTLAGCSTTPPTNDQVQIIEKNCAVILSEAANSEQRQNAY CCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCHHEEEHHHCCCHHHHHHH NQLIESYGERYVDANNRKQSTSWDLFRQNVIHDGNGQLTREFIEVSDWGCANGNYLEEVH HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCCCHHHHHH LFVEEAQTSGL HHHHHHHHCCC >Mature Secondary Structure MVLKVRKIVMKTRITVGLMGLTLAGCSTTPPTNDQVQIIEKNCAVILSEAANSEQRQNAY CCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCHHEEEHHHCCCHHHHHHH NQLIESYGERYVDANNRKQSTSWDLFRQNVIHDGNGQLTREFIEVSDWGCANGNYLEEVH HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCCCHHHHHH LFVEEAQTSGL HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA