| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156978020
Identifier: 156978020
GI number: 156978020
Start: 1932711
End: 1933355
Strand: Direct
Name: 156978020
Synonym: VIBHAR_06817
Alternate gene names: NA
Gene position: 1932711-1933355 (Clockwise)
Preceding gene: 156978019
Following gene: 156978023
Centisome position: 87.69
GC content: 47.75
Gene sequence:
>645_bases ATGGCATCAACCATCGGCGCTAATGGGCTGAGTATTGTACATAAAGGCTCAGGAGGTGAAGCGAACGCTTCTGTACCGGA CGTTTGTTTAACCAAAGTCGGAAAGCCTGTCGTTCCTATTCCGTACGGCAACAACGCTAAATCTGCCGATTTGGTGGACG GTTCAACCAGTGTCACAGCCGATGGTGGCAACAGTATTGCCTTGCAAGGCAGTAAGTTCTCAAAAAGTACAGGTGATGCC GCTGGCGATAAAAAAGGCGTGAGTTCAGGAACCATTGAAGGAGAAGCGCAGTTTGTGACGTCTTCTCCGAATGTCCTTAT CGAAGGAAAAGGAGTGGCACGCCAGAGTGATCAAATGACCATGAACAATGGCAATACCATGTGCTTCGGCGTACAGAACC CATCTTTCTCGGTCGAAGAAGATCTTGAAGAGACCTTTATCATGGACGTTTGTGTGCGTCACCCAAATGGTCAAAGACTG GTGAATGCGCCATTTAAACTCAGTGATGAGCAAGGTTCGACGGTATATGAAGCCACTTTGGATGATAAAGGGCGCAGTGA TGCCGACCCGCTCAAAGGTGGCAAGGGGCTTTGTTGCGTAATTCGGACAGAAAACCAAATTACCCGAAAATTGAGTGATT ATTAA
Upstream 100 bases:
>100_bases CGGTAAAAACCACCGCCCAAAACATCAATACTTCGGCAGATAAATTACAAAAAATTCAAGCGACCAAAGTGCGTTTAAAC TGATTGAAAAGGAAAAAATT
Downstream 100 bases:
>100_bases ACAACATACTGAGTTTCAGGCATACCAAGCCCTGTAAGCTTGTTCAGCGCTTTAATCATGGCGTAAGTCTCACCAACTTG AGCGTTGTAGTTCCTCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MASTIGANGLSIVHKGSGGEANASVPDVCLTKVGKPVVPIPYGNNAKSADLVDGSTSVTADGGNSIALQGSKFSKSTGDA AGDKKGVSSGTIEGEAQFVTSSPNVLIEGKGVARQSDQMTMNNGNTMCFGVQNPSFSVEEDLEETFIMDVCVRHPNGQRL VNAPFKLSDEQGSTVYEATLDDKGRSDADPLKGGKGLCCVIRTENQITRKLSDY
Sequences:
>Translated_214_residues MASTIGANGLSIVHKGSGGEANASVPDVCLTKVGKPVVPIPYGNNAKSADLVDGSTSVTADGGNSIALQGSKFSKSTGDA AGDKKGVSSGTIEGEAQFVTSSPNVLIEGKGVARQSDQMTMNNGNTMCFGVQNPSFSVEEDLEETFIMDVCVRHPNGQRL VNAPFKLSDEQGSTVYEATLDDKGRSDADPLKGGKGLCCVIRTENQITRKLSDY >Mature_213_residues ASTIGANGLSIVHKGSGGEANASVPDVCLTKVGKPVVPIPYGNNAKSADLVDGSTSVTADGGNSIALQGSKFSKSTGDAA GDKKGVSSGTIEGEAQFVTSSPNVLIEGKGVARQSDQMTMNNGNTMCFGVQNPSFSVEEDLEETFIMDVCVRHPNGQRLV NAPFKLSDEQGSTVYEATLDDKGRSDADPLKGGKGLCCVIRTENQITRKLSDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22238; Mature: 22107
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTIGANGLSIVHKGSGGEANASVPDVCLTKVGKPVVPIPYGNNAKSADLVDGSTSVTA CCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCEEECCCCEEEE DGGNSIALQGSKFSKSTGDAAGDKKGVSSGTIEGEAQFVTSSPNVLIEGKGVARQSDQMT CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCEE MNNGNTMCFGVQNPSFSVEEDLEETFIMDVCVRHPNGQRLVNAPFKLSDEQGSTVYEATL ECCCCEEEEEECCCCCCHHHHHHHHHHHHHHEECCCCCEEEECCEEECCCCCCEEEEEEC DDKGRSDADPLKGGKGLCCVIRTENQITRKLSDY CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCC >Mature Secondary Structure ASTIGANGLSIVHKGSGGEANASVPDVCLTKVGKPVVPIPYGNNAKSADLVDGSTSVTA CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCEEECCCCEEEE DGGNSIALQGSKFSKSTGDAAGDKKGVSSGTIEGEAQFVTSSPNVLIEGKGVARQSDQMT CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCEE MNNGNTMCFGVQNPSFSVEEDLEETFIMDVCVRHPNGQRLVNAPFKLSDEQGSTVYEATL ECCCCEEEEEECCCCCCHHHHHHHHHHHHHHEECCCCCEEEECCEEECCCCCCEEEEEEC DDKGRSDADPLKGGKGLCCVIRTENQITRKLSDY CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA