Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978019

Identifier: 156978019

GI number: 156978019

Start: 1932229

End: 1932693

Strand: Direct

Name: 156978019

Synonym: VIBHAR_06816

Alternate gene names: NA

Gene position: 1932229-1932693 (Clockwise)

Preceding gene: 156978007

Following gene: 156978020

Centisome position: 87.67

GC content: 43.01

Gene sequence:

>465_bases
ATGGAAACAGCAATGAAATCGTCGCAACCTGATGCTTCAAAAGAGGTCTACCCACGAATCGGTAAAGTCTATGAAGTTCA
CTCAGATAAATCTCGCGTTAAAGTCAATTTTCACGGGAATCCAATCGGTCAGCCTATATGGGCGGTCATAGGCCGAGCGT
TTAAAGCTTCTGACATAGATCTCGCTATTGATAATCAATTGAACTGCCAAATCAACTTTATGGATGGCGATCTTAGCCTT
CCTATCCTTGTTGACATTTTCACCTCTCTACTAGAGGAAGACCTATTGATACTCCGAGCCAAAAACATGGTTGTTCAAGG
CGATGAAAGTGTCGTCCTACGCTCAGGGGAGACTCAAGTATCAATGACGGCGAAAAGTGGCACGGTAAAAACCACCGCCC
AAAACATCAATACTTCGGCAGATAAATTACAAAAAATTCAAGCGACCAAAGTGCGTTTAAACTGA

Upstream 100 bases:

>100_bases
GAAATTGCGTGTAATTCACTACCGCCAGTTACTTTTTTTCCGTATAAAGAATAAGCACCTTGATTCATTTCGATTGTTAG
AATCCAAAGTTATTTGTTTT

Downstream 100 bases:

>100_bases
TTGAAAAGGAAAAAATTATGGCATCAACCATCGGCGCTAATGGGCTGAGTATTGTACATAAAGGCTCAGGAGGTGAAGCG
AACGCTTCTGTACCGGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
METAMKSSQPDASKEVYPRIGKVYEVHSDKSRVKVNFHGNPIGQPIWAVIGRAFKASDIDLAIDNQLNCQINFMDGDLSL
PILVDIFTSLLEEDLLILRAKNMVVQGDESVVLRSGETQVSMTAKSGTVKTTAQNINTSADKLQKIQATKVRLN

Sequences:

>Translated_154_residues
METAMKSSQPDASKEVYPRIGKVYEVHSDKSRVKVNFHGNPIGQPIWAVIGRAFKASDIDLAIDNQLNCQINFMDGDLSL
PILVDIFTSLLEEDLLILRAKNMVVQGDESVVLRSGETQVSMTAKSGTVKTTAQNINTSADKLQKIQATKVRLN
>Mature_154_residues
METAMKSSQPDASKEVYPRIGKVYEVHSDKSRVKVNFHGNPIGQPIWAVIGRAFKASDIDLAIDNQLNCQINFMDGDLSL
PILVDIFTSLLEEDLLILRAKNMVVQGDESVVLRSGETQVSMTAKSGTVKTTAQNINTSADKLQKIQATKVRLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16961; Mature: 16961

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METAMKSSQPDASKEVYPRIGKVYEVHSDKSRVKVNFHGNPIGQPIWAVIGRAFKASDID
CCCCCCCCCCCCCHHHHHCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCE
LAIDNQLNCQINFMDGDLSLPILVDIFTSLLEEDLLILRAKNMVVQGDESVVLRSGETQV
EEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCEEEECCCEEEEECCCCEE
SMTAKSGTVKTTAQNINTSADKLQKIQATKVRLN
EEEECCCEEEEHHCCCCCCHHHHHHHHHEEEECC
>Mature Secondary Structure
METAMKSSQPDASKEVYPRIGKVYEVHSDKSRVKVNFHGNPIGQPIWAVIGRAFKASDID
CCCCCCCCCCCCCHHHHHCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCE
LAIDNQLNCQINFMDGDLSLPILVDIFTSLLEEDLLILRAKNMVVQGDESVVLRSGETQV
EEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCEEEECCCEEEEECCCCEE
SMTAKSGTVKTTAQNINTSADKLQKIQATKVRLN
EEEECCCEEEEHHCCCCCCHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA