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The map label for this gene is 156978011

Identifier: 156978011

GI number: 156978011

Start: 1926352

End: 1927113

Strand: Reverse

Name: 156978011

Synonym: VIBHAR_06808

Alternate gene names: NA

Gene position: 1927113-1926352 (Counterclockwise)

Preceding gene: 156978012

Following gene: 156978010

Centisome position: 87.44

GC content: 40.68

Gene sequence:

>762_bases
ATGTTAGTATTCAACTGTACAAAAGCCGCTGCTAATTTTTTATCGCCACGTAAATCTCAAGACTCGACTCCATTGCTTCA
AGCTGTTCCTGAGTTTGATATTGAACATATAGGCTCATCTGAGCAACCAATCTCACAATGGTTGGTTCAACATACAAAAG
AATTAGACCAAGACATCTTGTATGTTTGTCATGTGCAACACCGCTTCACTATGGTCTTTACAGAGATCGAACAAGGCAAC
TGGTTGAGCTTTATGCAATGTTTCTGGGAGCGTCTGGTCAATCATCTTTCTTGGTTAGTTGATGAGATGCCATTTGACGT
TAAGAGTACGCCACAAGATTGGGTGGATAATATGCGAATTGTCCACAGTCCTCGCGGAGAGCGCGCTATTTTTTGTCAAC
GGTATAGTGCCAGTGTCAATGCCAGTGTTGGTCGATTTCGTTCTCACTTTGAAACTGCGTTGTATGAGATAGGCTGTTTA
CCAGACAATGAAGAGGCCGCGGGTTTTGAATTTAATGAGAACGCTCGTATTCACTTTTCTGGTCGCAGAAATGCTATGTT
CTATCCTGCGCATGAGCTGTTTTGCGAGTGTTTAGAAACTTATATGGGTGTAACCGAGAATGAACTGGCAACATTCAAAT
CATTATCTTTAGACTACTTTGAGAAAATATTACACGACATGATAAGTGGTCCAAATATTGATCCTGAAGATTCGCTCAAA
GTATTGCATTCCCTTATCAATAATGCAGAAGTCAAAAGGTAA

Upstream 100 bases:

>100_bases
GTCGCTTGCAAGTTGCGGAAACCGAAGTCGCTTAATCCACTCTCTAAACCTATGTGATGCACTGCCTCACATAGGTTGAC
TAAAAGCTAGGTAATACACA

Downstream 100 bases:

>100_bases
TCAGCATTAAACAATGCGTAAAGATACAATAAAAAAATAGGACGACAATGTCAGGCAACTTACCCAACTTCCGTGAAGAG
CAAAGCGCAAAAATCCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLVFNCTKAAANFLSPRKSQDSTPLLQAVPEFDIEHIGSSEQPISQWLVQHTKELDQDILYVCHVQHRFTMVFTEIEQGN
WLSFMQCFWERLVNHLSWLVDEMPFDVKSTPQDWVDNMRIVHSPRGERAIFCQRYSASVNASVGRFRSHFETALYEIGCL
PDNEEAAGFEFNENARIHFSGRRNAMFYPAHELFCECLETYMGVTENELATFKSLSLDYFEKILHDMISGPNIDPEDSLK
VLHSLINNAEVKR

Sequences:

>Translated_253_residues
MLVFNCTKAAANFLSPRKSQDSTPLLQAVPEFDIEHIGSSEQPISQWLVQHTKELDQDILYVCHVQHRFTMVFTEIEQGN
WLSFMQCFWERLVNHLSWLVDEMPFDVKSTPQDWVDNMRIVHSPRGERAIFCQRYSASVNASVGRFRSHFETALYEIGCL
PDNEEAAGFEFNENARIHFSGRRNAMFYPAHELFCECLETYMGVTENELATFKSLSLDYFEKILHDMISGPNIDPEDSLK
VLHSLINNAEVKR
>Mature_253_residues
MLVFNCTKAAANFLSPRKSQDSTPLLQAVPEFDIEHIGSSEQPISQWLVQHTKELDQDILYVCHVQHRFTMVFTEIEQGN
WLSFMQCFWERLVNHLSWLVDEMPFDVKSTPQDWVDNMRIVHSPRGERAIFCQRYSASVNASVGRFRSHFETALYEIGCL
PDNEEAAGFEFNENARIHFSGRRNAMFYPAHELFCECLETYMGVTENELATFKSLSLDYFEKILHDMISGPNIDPEDSLK
VLHSLINNAEVKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29333; Mature: 29333

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVFNCTKAAANFLSPRKSQDSTPLLQAVPEFDIEHIGSSEQPISQWLVQHTKELDQDIL
CEEEECHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
YVCHVQHRFTMVFTEIEQGNWLSFMQCFWERLVNHLSWLVDEMPFDVKSTPQDWVDNMRI
HHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCEE
VHSPRGERAIFCQRYSASVNASVGRFRSHFETALYEIGCLPDNEEAAGFEFNENARIHFS
EECCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEC
GRRNAMFYPAHELFCECLETYMGVTENELATFKSLSLDYFEKILHDMISGPNIDPEDSLK
CCCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH
VLHSLINNAEVKR
HHHHHHHHCCCCC
>Mature Secondary Structure
MLVFNCTKAAANFLSPRKSQDSTPLLQAVPEFDIEHIGSSEQPISQWLVQHTKELDQDIL
CEEEECHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
YVCHVQHRFTMVFTEIEQGNWLSFMQCFWERLVNHLSWLVDEMPFDVKSTPQDWVDNMRI
HHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCEE
VHSPRGERAIFCQRYSASVNASVGRFRSHFETALYEIGCLPDNEEAAGFEFNENARIHFS
EECCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEC
GRRNAMFYPAHELFCECLETYMGVTENELATFKSLSLDYFEKILHDMISGPNIDPEDSLK
CCCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH
VLHSLINNAEVKR
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA