Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977935

Identifier: 156977935

GI number: 156977935

Start: 1863978

End: 1864223

Strand: Direct

Name: 156977935

Synonym: VIBHAR_06730

Alternate gene names: NA

Gene position: 1863978-1864223 (Clockwise)

Preceding gene: 156977933

Following gene: 156977936

Centisome position: 84.57

GC content: 40.24

Gene sequence:

>246_bases
ATGAGTAATTTAAAAACCAAACTACGACAAATCATGCGAAAAACTCGCGATGAGTGGGCCATTTTTGCAGTAAAAGAGAT
GGGGATATCATCTGAAACTGTAGCTAAATCTTATGGCTACCGTTCGAGCTGTGATCTTGAGCAAACTCTTAAACAAGGCG
AAAAAGACGCCGCTTCGTATATTGGCTCGGAACCTTGTGCGAGATCTCTTACACGTAATGTAAGTAAAACGACCATTTTT
GACTAA

Upstream 100 bases:

>100_bases
TACGCCTCAATAGTATTGATATTGAGCGGCATACTATCAACTTGGCCTCACTTCGATCCTTATTCTTGCCTCGTAAAGAC
AAGCTAATTAGGGAGCGGCT

Downstream 100 bases:

>100_bases
GAATAAATCAAAAAACAAACCTAAACATATGAAAAATAATAACTATCCTTTTTTAAGCAATATTCGCTGCCAAAGTTTTT
TTATCTAGCTGATTGAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSNLKTKLRQIMRKTRDEWAIFAVKEMGISSETVAKSYGYRSSCDLEQTLKQGEKDAASYIGSEPCARSLTRNVSKTTIF
D

Sequences:

>Translated_81_residues
MSNLKTKLRQIMRKTRDEWAIFAVKEMGISSETVAKSYGYRSSCDLEQTLKQGEKDAASYIGSEPCARSLTRNVSKTTIF
D
>Mature_80_residues
SNLKTKLRQIMRKTRDEWAIFAVKEMGISSETVAKSYGYRSSCDLEQTLKQGEKDAASYIGSEPCARSLTRNVSKTTIFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9158; Mature: 9026

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLKTKLRQIMRKTRDEWAIFAVKEMGISSETVAKSYGYRSSCDLEQTLKQGEKDAASY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHCCHHHHHHH
IGSEPCARSLTRNVSKTTIFD
HCCCHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
SNLKTKLRQIMRKTRDEWAIFAVKEMGISSETVAKSYGYRSSCDLEQTLKQGEKDAASY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHCCHHHHHHH
IGSEPCARSLTRNVSKTTIFD
HCCCHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA