| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977829
Identifier: 156977829
GI number: 156977829
Start: 1764019
End: 1764438
Strand: Reverse
Name: 156977829
Synonym: VIBHAR_06617
Alternate gene names: NA
Gene position: 1764438-1764019 (Counterclockwise)
Preceding gene: 156977830
Following gene: 156977828
Centisome position: 80.06
GC content: 45.71
Gene sequence:
>420_bases ATGAAACAATCCATTATCCATATTGCTTTGGTCGTAAAAGACTACGATGAAGCGATTGATTTCTATGTGAATAAGCTGAA GTTTGAGCTGATGGAAGATACTTACCAACCAGAGCAAGACAAGCGTTGGGTTGTGGTTTCTCCACCGGGTTCTAATGGTG TGACATTATTGCTAGCCAAAGCGTCTAAGCCAGAGCAGCATGACTTCATCGGTAATCAAACCGGTGGACGTGTGTTCCTA TTTTTGAATACCGATGACTTCTGGCGTGACTACAATCGAATGGTAGAGCAGGGTATTAAGTTTGTTCGCCCGCCAGCGGA GCAAGACTACGGCACAGTCGCCGTATTTGAAGATCTCTATGGCAACCTGTGGGATTTGCTAGAAATGAGTCCAAGCCACC CAATGACTGCGCGTTCATAG
Upstream 100 bases:
>100_bases CGTGGCGGCCACTTACAAACCGAGTTGTTAGAAAACGGACGCATTAAACTGATTGGCTCCGCAAAGACGGTAATCAGCGG CAAACTCAAGGTATAACGCG
Downstream 100 bases:
>100_bases ATTCATACTAATTGATATTAACAGCGTCTTTCGGGGCGCTTTTTTTGTTTCATGTGTCCACCTTTCGTATTTCTTTCTTC TCTTCCCATTTCGCTTCACT
Product: lactoylglutathione lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKQSIIHIALVVKDYDEAIDFYVNKLKFELMEDTYQPEQDKRWVVVSPPGSNGVTLLLAKASKPEQHDFIGNQTGGRVFL FLNTDDFWRDYNRMVEQGIKFVRPPAEQDYGTVAVFEDLYGNLWDLLEMSPSHPMTARS
Sequences:
>Translated_139_residues MKQSIIHIALVVKDYDEAIDFYVNKLKFELMEDTYQPEQDKRWVVVSPPGSNGVTLLLAKASKPEQHDFIGNQTGGRVFL FLNTDDFWRDYNRMVEQGIKFVRPPAEQDYGTVAVFEDLYGNLWDLLEMSPSHPMTARS >Mature_139_residues MKQSIIHIALVVKDYDEAIDFYVNKLKFELMEDTYQPEQDKRWVVVSPPGSNGVTLLLAKASKPEQHDFIGNQTGGRVFL FLNTDDFWRDYNRMVEQGIKFVRPPAEQDYGTVAVFEDLYGNLWDLLEMSPSHPMTARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ywkD [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 16061; Mature: 16061
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSIIHIALVVKDYDEAIDFYVNKLKFELMEDTYQPEQDKRWVVVSPPGSNGVTLLLAK CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEE ASKPEQHDFIGNQTGGRVFLFLNTDDFWRDYNRMVEQGIKFVRPPAEQDYGTVAVFEDLY CCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHH GNLWDLLEMSPSHPMTARS HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKQSIIHIALVVKDYDEAIDFYVNKLKFELMEDTYQPEQDKRWVVVSPPGSNGVTLLLAK CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEE ASKPEQHDFIGNQTGGRVFLFLNTDDFWRDYNRMVEQGIKFVRPPAEQDYGTVAVFEDLY CCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHH GNLWDLLEMSPSHPMTARS HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1333793 [H]