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The map label for this gene is ybiT [H]

Identifier: 156977826

GI number: 156977826

Start: 1759825

End: 1761405

Strand: Reverse

Name: ybiT [H]

Synonym: VIBHAR_06614

Alternate gene names: 156977826

Gene position: 1761405-1759825 (Counterclockwise)

Preceding gene: 156977827

Following gene: 156977825

Centisome position: 79.92

GC content: 47.44

Gene sequence:

>1581_bases
ATGCAATTTGGTGCCGAGCCACTGTTCGAAAATATCTCTGCTAAATTTGGCAACGGCAACCGTTATGGTCTGATTGGCGC
AAACGGCTGTGGTAAGTCGACATTTATGAAAATCCTGAGTGGAGCACTAGCGCCAAGCTCAGGCAATGTGTCTATTACTC
CGGGGCTGAAGCTGGGCGTATTGAGCCAAGATCAGTTTGCGTTCGAGCAATACAGCGTGATTGACGCTGTGATCATGGGC
GACCGCAAGCTTTGGGAAGTGAAGCAGGAACGTGACCGCATCTATTCATTACCAGAAATGAGTGAAGAAGACGGCATGAA
AGTCGCTGAGCTTGAAAGCGAATTCGCAGAAATGGACGGCTACACCGCAGAAAGCCGTGCTGGCGATATTTTGCTTCAAG
CGGGTATTGAAGAAGAGCTGCATTTTGGTTTGATGCAGCAAGTTGCTCCGGGCTGGAAACTGCGTGTGCTTTTGGCGCAA
GCCCTGTTTGCAAACCCTGATATTTTGTTGCTCGACGAACCAACCAACAACTTGGATATTCACACCATCAACTGGTTGGC
AGAAGAGTTGAACCAACGTAAATGTACGATGATCATCATCTCGCACGACCGTCACTTCTTAAACTCTGTGTGTACTCACA
TGGCAGATATCGATTACGGTGAGTTGCGCATTTACCCTGGCAACTATGAATACTTCCTTGAAGCATCTGGTCTTCGTCGT
GAGCAGTTATTGGCTTCTAACGCGAAGAAAACCGCAGAAATCAACGAACTTCAAGAGTTCGTAAACCGTTTTGGTGCGAA
TGCATCGAAAGCAAAACAAGCCAGCTCTCGCGCTAAGAAGATGGAAAAAATCCAACTCGATGAAGTGAAAGCAAGTAGCC
GTGTTAGCCCATCGATTGATTTCGGTGAGGGCAAAAAACTGCATCGCTTAGCGTTGGAACTGCAAGACCTTGGTCACTCG
TTTGGTGATGAGCTGTTGTTTGAAAAAGGCAACTTGTTACTCGAAGCAGGCACTCGCCTTGCGATCATCGGTGAAAACGG
TGTGGGTAAAACGACCTTGCTGCGTTGCCTAGTGAACGAACTAGAGCAAACTCAGGGCGTAGTAAAGTGGTCTGAAAACG
CTTCGATTGGTTACTGCCCACAGGACAGCAGTGCAGATTTTGATAATGATCTGACCATCTTTGAGTGGATCTCGCAGTGG
CGTACCGTGAAGCATAATGACCTAATGGTGCGTGGCATTCTAGGTCGTTTGCTATTTACCGCTGACGACGCCAACAAAAA
AGCGAAAAACTGCTCGGGTGGTGAGAAGAACCGTCTGCTGTTTGGTAAGCTAATGATGCAAGACATCAACGTGCTGATCA
TGGATGAGCCAACCAACCACATGGATATGGAAGCCATCGAAGCACTGAACAGCGCATTAAAAGACTTCACTGGTACTTTG
ATCTTCGTTAGTCATGACCGTGAGTTCGTATCGTCTTTGGCGACGTCGATCATTGATGTGAAAGACAAAAAGCTAGTGAG
CTTCCAAGGTACGTTCGAAGAGTACATGGCACATCAGCAAAAAGTGTTGAGTGCCGCGTAA

Upstream 100 bases:

>100_bases
TGCCCTTGTCTCACCGTATCTCGAAAGTGAATTAACAACTGGTTATTTAAAAGAAATCTCCTTCGAGGACGCCGCTATCA
TTAGTACAAACAATATCACC

Downstream 100 bases:

>100_bases
CCAACGTAGCTAAGCCATATAATTTTGAACAAGCCAAGAAGATATACCTGTTAAACAGAGACTTTGATGGCTTGTTCACT
ATGATGAATTAATCTAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MQFGAEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPSSGNVSITPGLKLGVLSQDQFAFEQYSVIDAVIMG
DRKLWEVKQERDRIYSLPEMSEEDGMKVAELESEFAEMDGYTAESRAGDILLQAGIEEELHFGLMQQVAPGWKLRVLLAQ
ALFANPDILLLDEPTNNLDIHTINWLAEELNQRKCTMIIISHDRHFLNSVCTHMADIDYGELRIYPGNYEYFLEASGLRR
EQLLASNAKKTAEINELQEFVNRFGANASKAKQASSRAKKMEKIQLDEVKASSRVSPSIDFGEGKKLHRLALELQDLGHS
FGDELLFEKGNLLLEAGTRLAIIGENGVGKTTLLRCLVNELEQTQGVVKWSENASIGYCPQDSSADFDNDLTIFEWISQW
RTVKHNDLMVRGILGRLLFTADDANKKAKNCSGGEKNRLLFGKLMMQDINVLIMDEPTNHMDMEAIEALNSALKDFTGTL
IFVSHDREFVSSLATSIIDVKDKKLVSFQGTFEEYMAHQQKVLSAA

Sequences:

>Translated_526_residues
MQFGAEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPSSGNVSITPGLKLGVLSQDQFAFEQYSVIDAVIMG
DRKLWEVKQERDRIYSLPEMSEEDGMKVAELESEFAEMDGYTAESRAGDILLQAGIEEELHFGLMQQVAPGWKLRVLLAQ
ALFANPDILLLDEPTNNLDIHTINWLAEELNQRKCTMIIISHDRHFLNSVCTHMADIDYGELRIYPGNYEYFLEASGLRR
EQLLASNAKKTAEINELQEFVNRFGANASKAKQASSRAKKMEKIQLDEVKASSRVSPSIDFGEGKKLHRLALELQDLGHS
FGDELLFEKGNLLLEAGTRLAIIGENGVGKTTLLRCLVNELEQTQGVVKWSENASIGYCPQDSSADFDNDLTIFEWISQW
RTVKHNDLMVRGILGRLLFTADDANKKAKNCSGGEKNRLLFGKLMMQDINVLIMDEPTNHMDMEAIEALNSALKDFTGTL
IFVSHDREFVSSLATSIIDVKDKKLVSFQGTFEEYMAHQQKVLSAA
>Mature_526_residues
MQFGAEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPSSGNVSITPGLKLGVLSQDQFAFEQYSVIDAVIMG
DRKLWEVKQERDRIYSLPEMSEEDGMKVAELESEFAEMDGYTAESRAGDILLQAGIEEELHFGLMQQVAPGWKLRVLLAQ
ALFANPDILLLDEPTNNLDIHTINWLAEELNQRKCTMIIISHDRHFLNSVCTHMADIDYGELRIYPGNYEYFLEASGLRR
EQLLASNAKKTAEINELQEFVNRFGANASKAKQASSRAKKMEKIQLDEVKASSRVSPSIDFGEGKKLHRLALELQDLGHS
FGDELLFEKGNLLLEAGTRLAIIGENGVGKTTLLRCLVNELEQTQGVVKWSENASIGYCPQDSSADFDNDLTIFEWISQW
RTVKHNDLMVRGILGRLLFTADDANKKAKNCSGGEKNRLLFGKLMMQDINVLIMDEPTNHMDMEAIEALNSALKDFTGTL
IFVSHDREFVSSLATSIIDVKDKKLVSFQGTFEEYMAHQQKVLSAA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=526, Percent_Identity=29.8479087452471, Blast_Score=245, Evalue=7e-65,
Organism=Homo sapiens, GI27881506, Length=526, Percent_Identity=29.277566539924, Blast_Score=225, Evalue=1e-58,
Organism=Homo sapiens, GI10947137, Length=526, Percent_Identity=29.277566539924, Blast_Score=225, Evalue=1e-58,
Organism=Homo sapiens, GI69354671, Length=535, Percent_Identity=28.2242990654206, Blast_Score=202, Evalue=9e-52,
Organism=Homo sapiens, GI10947135, Length=535, Percent_Identity=28.2242990654206, Blast_Score=201, Evalue=1e-51,
Organism=Escherichia coli, GI1787041, Length=516, Percent_Identity=65.5038759689922, Blast_Score=713, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=513, Percent_Identity=31.5789473684211, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI2367384, Length=530, Percent_Identity=30, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI1787182, Length=504, Percent_Identity=30.1587301587302, Blast_Score=221, Evalue=7e-59,
Organism=Escherichia coli, GI1788165, Length=213, Percent_Identity=24.8826291079812, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1787029, Length=230, Percent_Identity=24.3478260869565, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788761, Length=232, Percent_Identity=24.5689655172414, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI48994943, Length=221, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786398, Length=218, Percent_Identity=27.5229357798165, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1789672, Length=229, Percent_Identity=24.4541484716157, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786319, Length=215, Percent_Identity=28.3720930232558, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1788450, Length=230, Percent_Identity=24.7826086956522, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=532, Percent_Identity=29.8872180451128, Blast_Score=244, Evalue=7e-65,
Organism=Caenorhabditis elegans, GI17553372, Length=536, Percent_Identity=32.2761194029851, Blast_Score=241, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI17559834, Length=539, Percent_Identity=28.7569573283859, Blast_Score=239, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6320874, Length=526, Percent_Identity=32.1292775665399, Blast_Score=253, Evalue=4e-68,
Organism=Saccharomyces cerevisiae, GI6321121, Length=531, Percent_Identity=32.391713747646, Blast_Score=247, Evalue=4e-66,
Organism=Saccharomyces cerevisiae, GI6323278, Length=404, Percent_Identity=27.4752475247525, Blast_Score=123, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6324314, Length=406, Percent_Identity=27.3399014778325, Blast_Score=118, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6325030, Length=384, Percent_Identity=24.7395833333333, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24642252, Length=531, Percent_Identity=31.8267419962335, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI18859989, Length=531, Percent_Identity=31.8267419962335, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24666836, Length=536, Percent_Identity=29.6641791044776, Blast_Score=237, Evalue=1e-62,
Organism=Drosophila melanogaster, GI24641342, Length=523, Percent_Identity=29.6367112810707, Blast_Score=226, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58657; Mature: 58657

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFGAEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPSSGNVSITPGLKLGV
CCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCEEEE
LSQDQFAFEQYSVIDAVIMGDRKLWEVKQERDRIYSLPEMSEEDGMKVAELESEFAEMDG
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
YTAESRAGDILLQAGIEEELHFGLMQQVAPGWKLRVLLAQALFANPDILLLDEPTNNLDI
CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCE
HTINWLAEELNQRKCTMIIISHDRHFLNSVCTHMADIDYGELRIYPGNYEYFLEASGLRR
EEHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCH
EQLLASNAKKTAEINELQEFVNRFGANASKAKQASSRAKKMEKIQLDEVKASSRVSPSID
HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FGEGKKLHRLALELQDLGHSFGDELLFEKGNLLLEAGTRLAIIGENGVGKTTLLRCLVNE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHHHHH
LEQTQGVVKWSENASIGYCPQDSSADFDNDLTIFEWISQWRTVKHNDLMVRGILGRLLFT
HHHHCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEE
ADDANKKAKNCSGGEKNRLLFGKLMMQDINVLIMDEPTNHMDMEAIEALNSALKDFTGTL
CCCCCCHHCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEE
IFVSHDREFVSSLATSIIDVKDKKLVSFQGTFEEYMAHQQKVLSAA
EEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQFGAEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPSSGNVSITPGLKLGV
CCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCEEEE
LSQDQFAFEQYSVIDAVIMGDRKLWEVKQERDRIYSLPEMSEEDGMKVAELESEFAEMDG
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
YTAESRAGDILLQAGIEEELHFGLMQQVAPGWKLRVLLAQALFANPDILLLDEPTNNLDI
CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCE
HTINWLAEELNQRKCTMIIISHDRHFLNSVCTHMADIDYGELRIYPGNYEYFLEASGLRR
EEHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCH
EQLLASNAKKTAEINELQEFVNRFGANASKAKQASSRAKKMEKIQLDEVKASSRVSPSID
HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
FGEGKKLHRLALELQDLGHSFGDELLFEKGNLLLEAGTRLAIIGENGVGKTTLLRCLVNE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHHHHH
LEQTQGVVKWSENASIGYCPQDSSADFDNDLTIFEWISQWRTVKHNDLMVRGILGRLLFT
HHHHCCCEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHEE
ADDANKKAKNCSGGEKNRLLFGKLMMQDINVLIMDEPTNHMDMEAIEALNSALKDFTGTL
CCCCCCHHCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEE
IFVSHDREFVSSLATSIIDVKDKKLVSFQGTFEEYMAHQQKVLSAA
EEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]