| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977825
Identifier: 156977825
GI number: 156977825
Start: 1759222
End: 1759668
Strand: Reverse
Name: 156977825
Synonym: VIBHAR_06613
Alternate gene names: NA
Gene position: 1759668-1759222 (Counterclockwise)
Preceding gene: 156977826
Following gene: 156977824
Centisome position: 79.84
GC content: 48.1
Gene sequence:
>447_bases ATGAGCCATGAATTTATGACCGACGAAGAACGTATTGAACTGCAGAAGAACAACCCACTGCACGGTCTAAAATTGGAAGA CATGTTGCAACAGCTTGTTGACCATTACGGTTGGGAAATCCTCGACACAGCAATGCGTATGAACTGTTTTAACACTAAGC CAAGCATTGCGAGCAGTGTTAAATACCTGAAGAAAACAGAATGGGCTCGCGAGCGTGTAGAAAACTTCTACCTATACCGT TACAAGCGCATGCCAAAGGCGTCTGAATACGAGTACAACCTGCCACCACGTGCACGTACTTTCCGTCATGGATTGGAGCC GCGTGAGCCAATGGAACTGACGGTTGAATCGATCCTGGCTTCACAAGCGAAGGCAGCATCTGCCCACAAAGAGCGTTCAG GAAAGCAACGCTCAGATCGTGCTCGTTTTAACAACCGCCGTCGATAA
Upstream 100 bases:
>100_bases AGAGACTTTGATGGCTTGTTCACTATGATGAATTAATCTAAACCTAATAAAGGTAAGGTGGTGAGTACCATGCTTACTAC CCATAATTAAGGAGCCGTTC
Downstream 100 bases:
>100_bases ACTTTCAGCTCTCTTGTTCTGTAGGCTTGATGCCTAGGTACAAGAATGATTTTGATGAAAAGCCAAACTACCCAGTTTGG CTTTTTTGTTGGTGCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSHEFMTDEERIELQKNNPLHGLKLEDMLQQLVDHYGWEILDTAMRMNCFNTKPSIASSVKYLKKTEWARERVENFYLYR YKRMPKASEYEYNLPPRARTFRHGLEPREPMELTVESILASQAKAASAHKERSGKQRSDRARFNNRRR
Sequences:
>Translated_148_residues MSHEFMTDEERIELQKNNPLHGLKLEDMLQQLVDHYGWEILDTAMRMNCFNTKPSIASSVKYLKKTEWARERVENFYLYR YKRMPKASEYEYNLPPRARTFRHGLEPREPMELTVESILASQAKAASAHKERSGKQRSDRARFNNRRR >Mature_147_residues SHEFMTDEERIELQKNNPLHGLKLEDMLQQLVDHYGWEILDTAMRMNCFNTKPSIASSVKYLKKTEWARERVENFYLYRY KRMPKASEYEYNLPPRARTFRHGLEPREPMELTVESILASQAKAASAHKERSGKQRSDRARFNNRRR
Specific function: Unknown
COG id: COG4628
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17723; Mature: 17592
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHEFMTDEERIELQKNNPLHGLKLEDMLQQLVDHYGWEILDTAMRMNCFNTKPSIASSV CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHH KYLKKTEWARERVENFYLYRYKRMPKASEYEYNLPPRARTFRHGLEPREPMELTVESILA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH SQAKAASAHKERSGKQRSDRARFNNRRR HHHHHHHHHHHHCCCHHHHHHHHCCCCC >Mature Secondary Structure SHEFMTDEERIELQKNNPLHGLKLEDMLQQLVDHYGWEILDTAMRMNCFNTKPSIASSV CCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHH KYLKKTEWARERVENFYLYRYKRMPKASEYEYNLPPRARTFRHGLEPREPMELTVESILA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH SQAKAASAHKERSGKQRSDRARFNNRRR HHHHHHHHHHHHCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA