| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977649
Identifier: 156977649
GI number: 156977649
Start: 1593248
End: 1594429
Strand: Direct
Name: 156977649
Synonym: VIBHAR_06437
Alternate gene names: NA
Gene position: 1593248-1594429 (Clockwise)
Preceding gene: 156977648
Following gene: 156977650
Centisome position: 72.29
GC content: 47.29
Gene sequence:
>1182_bases ATGGCGCTTGCTACCACGGTGGTTGGCTTCCATTCCTATGCAGACAGCATCAACACAACTACCTCGTCATTAACCTCAGT CCACGTTGCAGAGCAAAAACAATCGTTAGCATTGCAGATCAGTGCCAGTTACGCCGATCTTGAGTCTTCTTTGAAAGCTC AGATCACCGAAAAAAGCTTATCGATGCCGATAGACAAGTTGAATTCAGCTCAGCCCTACTCGACCTTCTCTAGCGAGATG CAAAAAGCCGATCTTAGCTATCGCAAGATGAAAGGTATCAATAACTTCAGTGATTCCGTTCTTGAAATCCGTATGGCTGA TGAAACCATGATTGACGCTTGGAAAGATGGTAAGAGCCCGCTGTTCGCATTCGAACCATCTGGTGACGATGCCGATTGGC AATACATTGAAGCGTATGACGTGTACGGGCAAGTTCATGAGTTAGACGTCTACCAAATGCCGGACGTCCCTGTCTTCGTG ATTGACAGTGATGGCGCCAAAGAGCTCAAAGCTGGCCTGATGGCGATGCAAGCAGAGCTGAACCAGCTTGGCATGACTAC CCAAATTAATGCCGACGGTAAAAACAGTGCAGACAACACTCAAAAACAACCTCTAATCAGCAAGGCTCGTCACTCTATAT CCGAATCAGAACCGGAAGAACTGAACACGACTCGGCTTACGAAGATTCGTTTAGCGGTAGATAGAGAGCCTTGGATCTCA GGTAAAGCCGAAATCTACGCGATCGTAACGGGCGTTGATGCCAGCCGTTTAGAACCGCAGATTGATCTTGTCGAAATGCC TTATCTGGATTACGACAAGCAAACCTATTACCCAAATCAAACCATCATTTTTTGGCCTCGTTACCGCTGGGGCGCAGCAG ACATCATTCTGATGGAGCACGATGACGGCACTAACTATAAAGATCTTGCAAAACTGCTGGTTAAAGCCGCAGAAGAAGTA CTGAAGATGATCCCTGACCCAGAGGTACAGGGCTATGTGATCATCCCGCAGATCACCAGCAAAATCATTGAGTTGATTCC AAACAATATCTTGGTAAACGATGATGACTTTGTAGACGTGTACTACACCCTACTGCAGAAAACCCCTTATGTTGACCGCC CTGGCGCAGGTGGTAACGCGGTGGCATCTTTCACCCCAGTCACCATATTGCCTACTGAATAA
Upstream 100 bases:
>100_bases CATTCACGAAATTGATAGGTTGATCCTTGTAGGGTAAATACTCTATTAGTGATAAAAATTAAAATAAGGACTTTTTATGA GACCATCATTCTCGATCAGT
Downstream 100 bases:
>100_bases CTTTAGGTTCATCACTTTGGCCAGTAGGACTCGCTGTTCTGTATCGAATTGCGCCTAGCCAGATAGGTAGAACGAGAGAA AAAAGCCCTTTCTAGAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MALATTVVGFHSYADSINTTTSSLTSVHVAEQKQSLALQISASYADLESSLKAQITEKSLSMPIDKLNSAQPYSTFSSEM QKADLSYRKMKGINNFSDSVLEIRMADETMIDAWKDGKSPLFAFEPSGDDADWQYIEAYDVYGQVHELDVYQMPDVPVFV IDSDGAKELKAGLMAMQAELNQLGMTTQINADGKNSADNTQKQPLISKARHSISESEPEELNTTRLTKIRLAVDREPWIS GKAEIYAIVTGVDASRLEPQIDLVEMPYLDYDKQTYYPNQTIIFWPRYRWGAADIILMEHDDGTNYKDLAKLLVKAAEEV LKMIPDPEVQGYVIIPQITSKIIELIPNNILVNDDDFVDVYYTLLQKTPYVDRPGAGGNAVASFTPVTILPTE
Sequences:
>Translated_393_residues MALATTVVGFHSYADSINTTTSSLTSVHVAEQKQSLALQISASYADLESSLKAQITEKSLSMPIDKLNSAQPYSTFSSEM QKADLSYRKMKGINNFSDSVLEIRMADETMIDAWKDGKSPLFAFEPSGDDADWQYIEAYDVYGQVHELDVYQMPDVPVFV IDSDGAKELKAGLMAMQAELNQLGMTTQINADGKNSADNTQKQPLISKARHSISESEPEELNTTRLTKIRLAVDREPWIS GKAEIYAIVTGVDASRLEPQIDLVEMPYLDYDKQTYYPNQTIIFWPRYRWGAADIILMEHDDGTNYKDLAKLLVKAAEEV LKMIPDPEVQGYVIIPQITSKIIELIPNNILVNDDDFVDVYYTLLQKTPYVDRPGAGGNAVASFTPVTILPTE >Mature_392_residues ALATTVVGFHSYADSINTTTSSLTSVHVAEQKQSLALQISASYADLESSLKAQITEKSLSMPIDKLNSAQPYSTFSSEMQ KADLSYRKMKGINNFSDSVLEIRMADETMIDAWKDGKSPLFAFEPSGDDADWQYIEAYDVYGQVHELDVYQMPDVPVFVI DSDGAKELKAGLMAMQAELNQLGMTTQINADGKNSADNTQKQPLISKARHSISESEPEELNTTRLTKIRLAVDREPWISG KAEIYAIVTGVDASRLEPQIDLVEMPYLDYDKQTYYPNQTIIFWPRYRWGAADIILMEHDDGTNYKDLAKLLVKAAEEVL KMIPDPEVQGYVIIPQITSKIIELIPNNILVNDDDFVDVYYTLLQKTPYVDRPGAGGNAVASFTPVTILPTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43836; Mature: 43705
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALATTVVGFHSYADSINTTTSSLTSVHVAEQKQSLALQISASYADLESSLKAQITEKSL CCHHHEEHHHHHHHCCCCCCHHHHHEEEEHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH SMPIDKLNSAQPYSTFSSEMQKADLSYRKMKGINNFSDSVLEIRMADETMIDAWKDGKSP CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCCCCC LFAFEPSGDDADWQYIEAYDVYGQVHELDVYQMPDVPVFVIDSDGAKELKAGLMAMQAEL EEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHH NQLGMTTQINADGKNSADNTQKQPLISKARHSISESEPEELNTTRLTKIRLAVDREPWIS HHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCC GKAEIYAIVTGVDASRLEPQIDLVEMPYLDYDKQTYYPNQTIIFWPRYRWGAADIILMEH CCEEEEEEEECCCHHHCCCCCEEEECCCCCCCCCEECCCCEEEEECCCCCCCEEEEEEEC DDGTNYKDLAKLLVKAAEEVLKMIPDPEVQGYVIIPQITSKIIELIPNNILVNDDDFVDV CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCEEECCCCHHHH YYTLLQKTPYVDRPGAGGNAVASFTPVTILPTE HHHHHHCCCCCCCCCCCCCCEEEECCEEEEECC >Mature Secondary Structure ALATTVVGFHSYADSINTTTSSLTSVHVAEQKQSLALQISASYADLESSLKAQITEKSL CHHHEEHHHHHHHCCCCCCHHHHHEEEEHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH SMPIDKLNSAQPYSTFSSEMQKADLSYRKMKGINNFSDSVLEIRMADETMIDAWKDGKSP CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCCCCC LFAFEPSGDDADWQYIEAYDVYGQVHELDVYQMPDVPVFVIDSDGAKELKAGLMAMQAEL EEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHH NQLGMTTQINADGKNSADNTQKQPLISKARHSISESEPEELNTTRLTKIRLAVDREPWIS HHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCC GKAEIYAIVTGVDASRLEPQIDLVEMPYLDYDKQTYYPNQTIIFWPRYRWGAADIILMEH CCEEEEEEEECCCHHHCCCCCEEEECCCCCCCCCEECCCCEEEEECCCCCCCEEEEEEEC DDGTNYKDLAKLLVKAAEEVLKMIPDPEVQGYVIIPQITSKIIELIPNNILVNDDDFVDV CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCEEECCCCHHHH YYTLLQKTPYVDRPGAGGNAVASFTPVTILPTE HHHHHHCCCCCCCCCCCCCCEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA