| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is yfbT [H]
Identifier: 156977648
GI number: 156977648
Start: 1592323
End: 1592967
Strand: Direct
Name: yfbT [H]
Synonym: VIBHAR_06436
Alternate gene names: 156977648
Gene position: 1592323-1592967 (Clockwise)
Preceding gene: 156977647
Following gene: 156977649
Centisome position: 72.25
GC content: 44.81
Gene sequence:
>645_bases ATGATTGAGTGTAAAAAGTTTATTTTTGATGTCGATGCAACGTTAGTTGATACTCAGGCCGTAATAGACAATATCTGGAA AAAGTGGTGTGAGACCGTTGGTGTCAGCTATGTTGATATGAGCCAATACATCCACGGAAGAAAAATTGAAGAAACCTTGC ACTGTATATCCCCAAGTTACGCTTGTGACGTACAAGTAGAGAAAGTAAAAAGCATCGCATTGTCTGAGATGACAAAGGCA CAGGCGATATCCAATGCCCATTCATTCATTTCCAACCTTAGTCCTAATGCTTGGGGTATTGCAACAAGCGGGCCAAAAAA AGTGGCGACCACCAGTCTACTAGCGTCAGGCTTTGATCTACCTAAAGTGATGATATGGGCCGAGGACGTCCTTAAGGGCA AACCAGACCCAGAACCGTTTATTAAAGCCGCTCATGCACTGAATGTCATTCCGTCCGAATGTGTGGCATTCGAAGATTCC CCCTCGGGCGTGTTATCAGCGAAAAGAGCTGGATGCTTTACGGTCGCGCTACTCACTAGCCATAGAGAAGATGAACTAAA AGATGCAGACCTTATCGTGCAAGGCTTTGGGCACCTAACGGTGATCAAAAACCACAATGGCTCTTATTGTCTAGCGGCTT CATAA
Upstream 100 bases:
>100_bases TGCAATCAGTGTGGTGAGTTCAGCGAGCAACTTTGAGCCATGTTATGAAAGCTATCCTCCTCCAACTTAAAGCAGCAGTA TTCGATAGGATTAAGAAATC
Downstream 100 bases:
>100_bases AACGATTCCGATAACTGATACACAGACAGATTCAGCAGTTAATAACGCCACAAATTCCTTATTTACCAATTTATAAACTA TGAAATATCAAGCTATCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MIECKKFIFDVDATLVDTQAVIDNIWKKWCETVGVSYVDMSQYIHGRKIEETLHCISPSYACDVQVEKVKSIALSEMTKA QAISNAHSFISNLSPNAWGIATSGPKKVATTSLLASGFDLPKVMIWAEDVLKGKPDPEPFIKAAHALNVIPSECVAFEDS PSGVLSAKRAGCFTVALLTSHREDELKDADLIVQGFGHLTVIKNHNGSYCLAAS
Sequences:
>Translated_214_residues MIECKKFIFDVDATLVDTQAVIDNIWKKWCETVGVSYVDMSQYIHGRKIEETLHCISPSYACDVQVEKVKSIALSEMTKA QAISNAHSFISNLSPNAWGIATSGPKKVATTSLLASGFDLPKVMIWAEDVLKGKPDPEPFIKAAHALNVIPSECVAFEDS PSGVLSAKRAGCFTVALLTSHREDELKDADLIVQGFGHLTVIKNHNGSYCLAAS >Mature_214_residues MIECKKFIFDVDATLVDTQAVIDNIWKKWCETVGVSYVDMSQYIHGRKIEETLHCISPSYACDVQVEKVKSIALSEMTKA QAISNAHSFISNLSPNAWGIATSGPKKVATTSLLASGFDLPKVMIWAEDVLKGKPDPEPFIKAAHALNVIPSECVAFEDS PSGVLSAKRAGCFTVALLTSHREDELKDADLIVQGFGHLTVIKNHNGSYCLAAS
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI87082080, Length=215, Percent_Identity=31.6279069767442, Blast_Score=121, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6321834, Length=226, Percent_Identity=29.2035398230088, Blast_Score=79, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6321833, Length=225, Percent_Identity=28.4444444444444, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320905, Length=210, Percent_Identity=29.0476190476191, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6322136, Length=213, Percent_Identity=28.6384976525822, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23257; Mature: 23257
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIECKKFIFDVDATLVDTQAVIDNIWKKWCETVGVSYVDMSQYIHGRKIEETLHCISPSY CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCHHHHHHHHCCCCC ACDVQVEKVKSIALSEMTKAQAISNAHSFISNLSPNAWGIATSGPKKVATTSLLASGFDL EECEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHCCCCC PKVMIWAEDVLKGKPDPEPFIKAAHALNVIPSECVAFEDSPSGVLSAKRAGCFTVALLTS CHHHEEHHHHHCCCCCCHHHHHHHHHHHCCCHHHEEECCCCCCHHHHHCCCCEEEEEECC HREDELKDADLIVQGFGHLTVIKNHNGSYCLAAS CCCCHHHHHHHHEECCCCEEEEECCCCCEEEECC >Mature Secondary Structure MIECKKFIFDVDATLVDTQAVIDNIWKKWCETVGVSYVDMSQYIHGRKIEETLHCISPSY CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCHHHHHHHHCCCCC ACDVQVEKVKSIALSEMTKAQAISNAHSFISNLSPNAWGIATSGPKKVATTSLLASGFDL EECEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHCCCCC PKVMIWAEDVLKGKPDPEPFIKAAHALNVIPSECVAFEDSPSGVLSAKRAGCFTVALLTS CHHHEEHHHHHCCCCCCHHHHHHHHHHHCCCHHHEEECCCCCCHHHHHCCCCEEEEEECC HREDELKDADLIVQGFGHLTVIKNHNGSYCLAAS CCCCHHHHHHHHEECCCCEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]