| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is yhhW [C]
Identifier: 156977629
GI number: 156977629
Start: 1580128
End: 1580976
Strand: Reverse
Name: yhhW [C]
Synonym: VIBHAR_06417
Alternate gene names: 156977629
Gene position: 1580976-1580128 (Counterclockwise)
Preceding gene: 156977636
Following gene: 156977628
Centisome position: 71.73
GC content: 49.23
Gene sequence:
>849_bases ATGAGTACAGTGAGAGAGATTCGTCAGATCATTCCATCGCACGCAACAGCAGATGGGGATGGAGTGAAAATTCGTCGCGT AGCCGGATTCAACAATACGAGCTTTTCACCATTCTTGATGGTGGATGAATTGAAATCAGACCAACGAGCAGACTATGTTG GCGGTTTTCCTCCGCATCCACATCGTGGTATTGAAACTCTGACCTATATGCTGACTGGGCACTTCCAGCATCGTGATCAC ATGAACAACGTTGGTGAGCTCCGTTCCGGCGGCGCGCAATGGATGGCGGCAGGCCGTGGTGTGATTCACAGTGAAATGCC AATCATGGAAGACGGTGAACTACATGGTTTCCAAATTTGGATTAACCAACCAGCACGAGACAAGATGTCTACGGCGCAGT ATCACGATTTCCAGCCGGAAACCATTACCGAGCATCGTGCAGAGGCTCATGGTTTAGTCCGTGTTATCTCTGGTGAGCTG AACATTGGTGATGAGGTAATTCATGGCCCATTGAGCCGAACGGGTGTGCCAGTGACTGTTGCCGATTGGCGAGCTCATTC AGGCGCCGCGCTCAATCTTATGACGCCTAAACATCATAATATGATGACCTATGTTTACAAAGGCAGCATCAAAGCGGGTG AACGTGTTGTCACGCAAGGCGAGATGGCATTGCTTTCTCAAGGAGAATGGGTGGCGCTACAAGCCAATGACACCAGTGGC GTGTTGCTCTTTATTGGCGAACCGATTAATGAACCTGTCGTGCAGTATGGCCCGTTTGTGATGAACAGCATCGACGAGAT TGAACAAGTGATTCAAGACTACAACTCTGGCGTGTTTGAAACCTACTAA
Upstream 100 bases:
>100_bases TTTTCGTTCGAAAAAACTGATGGAGTAGAACAATTTCATCCCCTCATGATTTTTATCCGTCTTCCTACAATGAATCCATA CCAATAAGGGAGGCAATATT
Downstream 100 bases:
>100_bases GGCATTTAATGCCCGATAGCCGGTACAAAGTCTTGAAAATGATGCTCTAGGTATGAGTACGAGAGGAAAACTCGAAGTGA TTTGGAGCCCGTTAATTGGG
Product: hypoxanthine phosphoribosyltransferase
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein VC_A0969 [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSTVREIRQIIPSHATADGDGVKIRRVAGFNNTSFSPFLMVDELKSDQRADYVGGFPPHPHRGIETLTYMLTGHFQHRDH MNNVGELRSGGAQWMAAGRGVIHSEMPIMEDGELHGFQIWINQPARDKMSTAQYHDFQPETITEHRAEAHGLVRVISGEL NIGDEVIHGPLSRTGVPVTVADWRAHSGAALNLMTPKHHNMMTYVYKGSIKAGERVVTQGEMALLSQGEWVALQANDTSG VLLFIGEPINEPVVQYGPFVMNSIDEIEQVIQDYNSGVFETY
Sequences:
>Translated_282_residues MSTVREIRQIIPSHATADGDGVKIRRVAGFNNTSFSPFLMVDELKSDQRADYVGGFPPHPHRGIETLTYMLTGHFQHRDH MNNVGELRSGGAQWMAAGRGVIHSEMPIMEDGELHGFQIWINQPARDKMSTAQYHDFQPETITEHRAEAHGLVRVISGEL NIGDEVIHGPLSRTGVPVTVADWRAHSGAALNLMTPKHHNMMTYVYKGSIKAGERVVTQGEMALLSQGEWVALQANDTSG VLLFIGEPINEPVVQYGPFVMNSIDEIEQVIQDYNSGVFETY >Mature_281_residues STVREIRQIIPSHATADGDGVKIRRVAGFNNTSFSPFLMVDELKSDQRADYVGGFPPHPHRGIETLTYMLTGHFQHRDHM NNVGELRSGGAQWMAAGRGVIHSEMPIMEDGELHGFQIWINQPARDKMSTAQYHDFQPETITEHRAEAHGLVRVISGELN IGDEVIHGPLSRTGVPVTVADWRAHSGAALNLMTPKHHNMMTYVYKGSIKAGERVVTQGEMALLSQGEWVALQANDTSGV LLFIGEPINEPVVQYGPFVMNSIDEIEQVIQDYNSGVFETY
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=285, Percent_Identity=34.3859649122807, Blast_Score=157, Evalue=9e-39, Organism=Homo sapiens, GI4505823, Length=285, Percent_Identity=34.3859649122807, Blast_Score=157, Evalue=9e-39, Organism=Escherichia coli, GI1789847, Length=67, Percent_Identity=44.7761194029851, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31331; Mature: 31200
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVREIRQIIPSHATADGDGVKIRRVAGFNNTSFSPFLMVDELKSDQRADYVGGFPPHP CCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCC HRGIETLTYMLTGHFQHRDHMNNVGELRSGGAQWMAAGRGVIHSEMPIMEDGELHGFQIW CCHHHHHHHHHHCCHHHHHHHCCHHHHHCCCHHHHHHCCCEEECCCCCCCCCCCEEEEEE INQPARDKMSTAQYHDFQPETITEHRAEAHGLVRVISGELNIGDEVIHGPLSRTGVPVTV ECCCCCHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCHHCCCCEEE ADWRAHSGAALNLMTPKHHNMMTYVYKGSIKAGERVVTQGEMALLSQGEWVALQANDTSG ECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEECCCCEEEECCCCEEEEEECCCCC VLLFIGEPINEPVVQYGPFVMNSIDEIEQVIQDYNSGVFETY EEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure STVREIRQIIPSHATADGDGVKIRRVAGFNNTSFSPFLMVDELKSDQRADYVGGFPPHP CHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCC HRGIETLTYMLTGHFQHRDHMNNVGELRSGGAQWMAAGRGVIHSEMPIMEDGELHGFQIW CCHHHHHHHHHHCCHHHHHHHCCHHHHHCCCHHHHHHCCCEEECCCCCCCCCCCEEEEEE INQPARDKMSTAQYHDFQPETITEHRAEAHGLVRVISGELNIGDEVIHGPLSRTGVPVTV ECCCCCHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCHHCCCCEEE ADWRAHSGAALNLMTPKHHNMMTYVYKGSIKAGERVVTQGEMALLSQGEWVALQANDTSG ECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEECCCCEEEECCCCEEEEEECCCCC VLLFIGEPINEPVVQYGPFVMNSIDEIEQVIQDYNSGVFETY EEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]