| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977628
Identifier: 156977628
GI number: 156977628
Start: 1579913
End: 1580032
Strand: Reverse
Name: 156977628
Synonym: VIBHAR_06416
Alternate gene names: NA
Gene position: 1580032-1579913 (Counterclockwise)
Preceding gene: 156977629
Following gene: 156977626
Centisome position: 71.69
GC content: 45.83
Gene sequence:
>120_bases TTGGGCTTATACGCAAGCAAAGGCGATATCCACTGCCATCGAATTTGCATCAGCCACACCGACATGGTGTGGCTTTTTTT GTTGTTCAGGTTTTATGACCGAGAATCGGTGATTGAGTGA
Upstream 100 bases:
>100_bases ACTAAGGCATTTAATGCCCGATAGCCGGTACAAAGTCTTGAAAATGATGCTCTAGGTATGAGTACGAGAGGAAAACTCGA AGTGATTTGGAGCCCGTTAA
Downstream 100 bases:
>100_bases AGCCCGCTTTTTGGGTTGGGCGAGCGTTTAGCTTTGTTCCCAGCACTCGATGGCGTGCTGACCATATTCCACACCCAGTT CATAAGCTTCACGTAAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 38
Protein sequence:
>39_residues MGLYASKGDIHCHRICISHTDMVWLFLLFRFYDRESVIE
Sequences:
>Translated_39_residues MGLYASKGDIHCHRICISHTDMVWLFLLFRFYDRESVIE >Mature_38_residues GLYASKGDIHCHRICISHTDMVWLFLLFRFYDRESVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4704; Mature: 4572
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLYASKGDIHCHRICISHTDMVWLFLLFRFYDRESVIE CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure GLYASKGDIHCHRICISHTDMVWLFLLFRFYDRESVIE CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA