| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977612
Identifier: 156977612
GI number: 156977612
Start: 1568861
End: 1569685
Strand: Direct
Name: 156977612
Synonym: VIBHAR_06400
Alternate gene names: NA
Gene position: 1568861-1569685 (Clockwise)
Preceding gene: 156977611
Following gene: 156977616
Centisome position: 71.18
GC content: 48.97
Gene sequence:
>825_bases ATGCCTAACCCGTTATCAGAGCTCAACTTGGAGAGCCTGAAACAGATCGGATGGCTGCTGACCGACGTGGACGACACGTT GACTTGGCAAGGTAAACTGCCACCAGAGACATTAGTTGCGCTAGCCGAGCTAGAGCGTGTGGGCGTAAAAGTGGTCGCAG TCACAGGCGCCTGCGCTGGTTGGTGTGACCAAATGGCAAAGATGTGGTCACTGCATGGTGTAATTGGTGAAAATGGCGCG TTTTGGATGAGAAAAGACGCGACAGGATTCAACACCACCTTTGCCCGTCCGGCAGAAGTGATGCGCAAAGAACAGTATGC ATTGCAAGAAAGCATTGCGGGCATTTTGGCAGAGTATCCTGATGTCGACTTCAGCCACGATCAGAGCTTTCGCTACTGCG ACGTGGCGGTGAACATCGCACAAGATAGAGCGCCGGTCCCTCCTTCTACGACAATGGAAATCCTCAATCGCATCGTGAAT TTGAATGTGGAATCCCACCCCGTCAACGCAACATTGAGTTCAATTCACATCAATGCATGGGTGGGCAATCACATTAAGCG CACTAGTGGTGAGGCCTACATTAGGCAGTTCAATAACGGCGAGTTACCGAGCTTAGGTCACATCACGTATGTGGGTGATT CATTGAATGATGAAGGCATGTTTGAATGGTTGCCAACAACCTTTGGCGTGAACAATATTCGTCCCTTGTTGGCGAAATTG AACCATCAACCAAGCTTTTTAACTGAGGAAAATGGCGGCTTTGGGTTTGCACAGTTAGCAAATCTTATCGTCAAAGCAAA AAAGGACAACAACACTAGCGAGTAA
Upstream 100 bases:
>100_bases AAACGCATCGAGTGTACACTGGCCCCAGCGGAATCATTGCAAGACGTCAGTGACGAAACCCAAGCAATAAATCCTCAAGT AAACAATCAAGGAGTGGTGA
Downstream 100 bases:
>100_bases ACCAAGCCGCTTGTTGTGATCTGCTATGAATAAGAGGGCGTTGATGGTTCTTTGGTAAACAAATTATGAATAAATTGACG CTCTTCTTCACTTAAAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: HAD-Superfamily Hydrolase Subfamily IIB; Hydrolase; Had-Superfamily Hydrolase Subfamily IIb; HAD-Superfamily Hydrolase; Hydrolase Protein; IIB Family HAD Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase Of Had Superfamily Protein; Archae-Like Hydrolase Family Protein
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MPNPLSELNLESLKQIGWLLTDVDDTLTWQGKLPPETLVALAELERVGVKVVAVTGACAGWCDQMAKMWSLHGVIGENGA FWMRKDATGFNTTFARPAEVMRKEQYALQESIAGILAEYPDVDFSHDQSFRYCDVAVNIAQDRAPVPPSTTMEILNRIVN LNVESHPVNATLSSIHINAWVGNHIKRTSGEAYIRQFNNGELPSLGHITYVGDSLNDEGMFEWLPTTFGVNNIRPLLAKL NHQPSFLTEENGGFGFAQLANLIVKAKKDNNTSE
Sequences:
>Translated_274_residues MPNPLSELNLESLKQIGWLLTDVDDTLTWQGKLPPETLVALAELERVGVKVVAVTGACAGWCDQMAKMWSLHGVIGENGA FWMRKDATGFNTTFARPAEVMRKEQYALQESIAGILAEYPDVDFSHDQSFRYCDVAVNIAQDRAPVPPSTTMEILNRIVN LNVESHPVNATLSSIHINAWVGNHIKRTSGEAYIRQFNNGELPSLGHITYVGDSLNDEGMFEWLPTTFGVNNIRPLLAKL NHQPSFLTEENGGFGFAQLANLIVKAKKDNNTSE >Mature_273_residues PNPLSELNLESLKQIGWLLTDVDDTLTWQGKLPPETLVALAELERVGVKVVAVTGACAGWCDQMAKMWSLHGVIGENGAF WMRKDATGFNTTFARPAEVMRKEQYALQESIAGILAEYPDVDFSHDQSFRYCDVAVNIAQDRAPVPPSTTMEILNRIVNL NVESHPVNATLSSIHINAWVGNHIKRTSGEAYIRQFNNGELPSLGHITYVGDSLNDEGMFEWLPTTFGVNNIRPLLAKLN HQPSFLTEENGGFGFAQLANLIVKAKKDNNTSE
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30326; Mature: 30194
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNPLSELNLESLKQIGWLLTDVDDTLTWQGKLPPETLVALAELERVGVKVVAVTGACAG CCCCHHHCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCEEEEEECCHHHH WCDQMAKMWSLHGVIGENGAFWMRKDATGFNTTFARPAEVMRKEQYALQESIAGILAEYP HHHHHHHHHHHHCEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC DVDFSHDQSFRYCDVAVNIAQDRAPVPPSTTMEILNRIVNLNVESHPVNATLSSIHINAW CCCCCCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEE VGNHIKRTSGEAYIRQFNNGELPSLGHITYVGDSLNDEGMFEWLPTTFGVNNIRPLLAKL CCCCHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHC NHQPSFLTEENGGFGFAQLANLIVKAKKDNNTSE CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PNPLSELNLESLKQIGWLLTDVDDTLTWQGKLPPETLVALAELERVGVKVVAVTGACAG CCCHHHCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCEEEEEECCHHHH WCDQMAKMWSLHGVIGENGAFWMRKDATGFNTTFARPAEVMRKEQYALQESIAGILAEYP HHHHHHHHHHHHCEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC DVDFSHDQSFRYCDVAVNIAQDRAPVPPSTTMEILNRIVNLNVESHPVNATLSSIHINAW CCCCCCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEE VGNHIKRTSGEAYIRQFNNGELPSLGHITYVGDSLNDEGMFEWLPTTFGVNNIRPLLAKL CCCCHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHC NHQPSFLTEENGGFGFAQLANLIVKAKKDNNTSE CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA