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The map label for this gene is ybcL [H]

Identifier: 156977554

GI number: 156977554

Start: 1509791

End: 1510324

Strand: Reverse

Name: ybcL [H]

Synonym: VIBHAR_06342

Alternate gene names: 156977554

Gene position: 1510324-1509791 (Counterclockwise)

Preceding gene: 156977555

Following gene: 156977553

Centisome position: 68.53

GC content: 47.75

Gene sequence:

>534_bases
ATGAAAGCAATCACTACATCGGTTTTGGCATTAAGCTTATTGGCAGTGGGTTCAGCTCAAGCATTTGAGTTAACCAGTAA
TGACATCCAAGAAGGCCACCCAATGGCCAAAACGTTTGAATATAACAGCTGGGGCTGTGATGGTGGCAACCAGTCTCCAC
AGCTGATGTGGAAAGATGCGCCTGCAGGCACAAAAAGCTTTGCAATCACGGCTTATGACCCAGATGCGCCTACTGGCAGT
GGTTTCTGGCACTGGGTTGCGTTTAATATTCCTGCTAACGTGAATGAACTTCCACGCGGTGTGAACATTGAGAAATTGGG
TGGTAAAGAGTCTCGTATTGATTACGGCACCGTAGGCTTTGGTGGTGTTTGTCCTCCAAAAACGGACGGTATGCATCGTT
ACCAGTTCACAGTATGGGCGTTGCCAACGGCCAAACTAAATCTTGATGAGAATACACCTGCGGCGGTGGTTGGCTTTACA
CTAAATAGCATGGCGCTAGACAAAGCAAAACTGACGGCAACTTACACGCGCTAA

Upstream 100 bases:

>100_bases
ACTTGTTGGCTTAAAATGACCGTTATTGATACTTAATGAAAGGTTGCTATTTCTTTTGGGGCATACACTTATCCCGAACT
TAAGAAATAGGAGCATCATC

Downstream 100 bases:

>100_bases
GGTGCGACAGAGGCGAAAGCAAGGGGAAATAATGAGTCATCAATATCAAATTACGATATTTCGTGCAGAGCAGTTACAGA
AGCTGCGCAATGTGAGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKAITTSVLALSLLAVGSAQAFELTSNDIQEGHPMAKTFEYNSWGCDGGNQSPQLMWKDAPAGTKSFAITAYDPDAPTGS
GFWHWVAFNIPANVNELPRGVNIEKLGGKESRIDYGTVGFGGVCPPKTDGMHRYQFTVWALPTAKLNLDENTPAAVVGFT
LNSMALDKAKLTATYTR

Sequences:

>Translated_177_residues
MKAITTSVLALSLLAVGSAQAFELTSNDIQEGHPMAKTFEYNSWGCDGGNQSPQLMWKDAPAGTKSFAITAYDPDAPTGS
GFWHWVAFNIPANVNELPRGVNIEKLGGKESRIDYGTVGFGGVCPPKTDGMHRYQFTVWALPTAKLNLDENTPAAVVGFT
LNSMALDKAKLTATYTR
>Mature_177_residues
MKAITTSVLALSLLAVGSAQAFELTSNDIQEGHPMAKTFEYNSWGCDGGNQSPQLMWKDAPAGTKSFAITAYDPDAPTGS
GFWHWVAFNIPANVNELPRGVNIEKLGGKESRIDYGTVGFGGVCPPKTDGMHRYQFTVWALPTAKLNLDENTPAAVVGFT
LNSMALDKAKLTATYTR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=180, Percent_Identity=45.5555555555556, Blast_Score=169, Evalue=9e-44,
Organism=Escherichia coli, GI1786990, Length=159, Percent_Identity=44.0251572327044, Blast_Score=143, Evalue=8e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 19047; Mature: 19047

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAITTSVLALSLLAVGSAQAFELTSNDIQEGHPMAKTFEYNSWGCDGGNQSPQLMWKDA
CCCHHHHHHHHHHHHCCCCCEEEECCCCHHCCCCCEEEEECCCCCCCCCCCCCEEEEECC
PAGTKSFAITAYDPDAPTGSGFWHWVAFNIPANVNELPRGVNIEKLGGKESRIDYGTVGF
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHCCCCCCCHHCCCCCCCEEECCCCC
GGVCPPKTDGMHRYQFTVWALPTAKLNLDENTPAAVVGFTLNSMALDKAKLTATYTR
CCCCCCCCCCCEEEEEEEEEECEEEEECCCCCCEEEEEEEECCEEECCEEEEEEECC
>Mature Secondary Structure
MKAITTSVLALSLLAVGSAQAFELTSNDIQEGHPMAKTFEYNSWGCDGGNQSPQLMWKDA
CCCHHHHHHHHHHHHCCCCCEEEECCCCHHCCCCCEEEEECCCCCCCCCCCCCEEEEECC
PAGTKSFAITAYDPDAPTGSGFWHWVAFNIPANVNELPRGVNIEKLGGKESRIDYGTVGF
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHCCCCCCCHHCCCCCCCEEECCCCC
GGVCPPKTDGMHRYQFTVWALPTAKLNLDENTPAAVVGFTLNSMALDKAKLTATYTR
CCCCCCCCCCCEEEEEEEEEECEEEEECCCCCCEEEEEEEECCEEECCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]