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The map label for this gene is yybR [H]

Identifier: 156977548

GI number: 156977548

Start: 1505711

End: 1506079

Strand: Reverse

Name: yybR [H]

Synonym: VIBHAR_06336

Alternate gene names: 156977548

Gene position: 1506079-1505711 (Counterclockwise)

Preceding gene: 156977549

Following gene: 156977545

Centisome position: 68.33

GC content: 46.61

Gene sequence:

>369_bases
GTGGAAAGCAAAATCAGTGTAGATAGCAAAGGTCGTAAGTCAGTGACGAACGTATGTGCGGAGCCATGTGCTATCGAGAA
AGGGATGCGTCTAATTGGTGGTAAATGGAAAGGCTCTTTGATTTTTCATTTGAAAGATGGCCCAGTTCGTTTCAATGATC
TGGCACGCATGCTAGGCGGCGCAAGCAAAAAGATGATCGACCAACGCCTTAAAGAGCTAGAAGCGGAAGGTATGGTGGTG
CGCAAAGTGATTAGCGACCGACCAATTGCAGTCGGCTATGAGCTCACTGAGTTTGGCCGTACCGCACTTAAGATTCTTGA
TGATTTGCGAATCTGGTCTGAGACTCACCAGATTGAGTTGCGTAAATAA

Upstream 100 bases:

>100_bases
ATTTGTTTGCGGCGAGGTGACGTTTTTATTACTCTAAAGCACTAAATGTATCTAGCTTACTTTTCGTTACCTAGATTAGG
TGCGTATCTTGAGGTGTATT

Downstream 100 bases:

>100_bases
CGCGGCCTGTTGTATCTCATCATCGCTTAACGGTTTAAGCCAATAAAAATGCCAGCATATTGCTGGCATTTTTTATGGTG
CGCCGAGCATGGCGTTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MESKISVDSKGRKSVTNVCAEPCAIEKGMRLIGGKWKGSLIFHLKDGPVRFNDLARMLGGASKKMIDQRLKELEAEGMVV
RKVISDRPIAVGYELTEFGRTALKILDDLRIWSETHQIELRK

Sequences:

>Translated_122_residues
MESKISVDSKGRKSVTNVCAEPCAIEKGMRLIGGKWKGSLIFHLKDGPVRFNDLARMLGGASKKMIDQRLKELEAEGMVV
RKVISDRPIAVGYELTEFGRTALKILDDLRIWSETHQIELRK
>Mature_122_residues
MESKISVDSKGRKSVTNVCAEPCAIEKGMRLIGGKWKGSLIFHLKDGPVRFNDLARMLGGASKKMIDQRLKELEAEGMVV
RKVISDRPIAVGYELTEFGRTALKILDDLRIWSETHQIELRK

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13741; Mature: 13741

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESKISVDSKGRKSVTNVCAEPCAIEKGMRLIGGKWKGSLIFHLKDGPVRFNDLARMLGG
CCCCCCCCCCCHHHHHHHHHCHHHHHHCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCC
ASKKMIDQRLKELEAEGMVVRKVISDRPIAVGYELTEFGRTALKILDDLRIWSETHQIEL
CHHHHHHHHHHHHHHCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEE
RK
CC
>Mature Secondary Structure
MESKISVDSKGRKSVTNVCAEPCAIEKGMRLIGGKWKGSLIFHLKDGPVRFNDLARMLGG
CCCCCCCCCCCHHHHHHHHHCHHHHHHCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCC
ASKKMIDQRLKELEAEGMVVRKVISDRPIAVGYELTEFGRTALKILDDLRIWSETHQIEL
CHHHHHHHHHHHHHHCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEE
RK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]