| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977527
Identifier: 156977527
GI number: 156977527
Start: 1492052
End: 1492363
Strand: Reverse
Name: 156977527
Synonym: VIBHAR_06315
Alternate gene names: NA
Gene position: 1492363-1492052 (Counterclockwise)
Preceding gene: 156977529
Following gene: 156977524
Centisome position: 67.71
GC content: 41.99
Gene sequence:
>312_bases GTGTCGAAGCGATTTTCTTTCACGATCGTTGGGATGATGTTTTCTTTGGGGATGTTTAGCGCTGAAGTCGCTGCACATCC AAAACATCACCACAAGCACGGACATCATCACGGGCATCACCATCATCATCACAAGCATAAACACAAAAAGGTTGTGGTGG TTAAGCACAAGCGACCAAAACATCATTACTACCATTACAAACACATTCCACCACGCGGTACCTACATTCAGATAGGTAAT TTTACTTACCTAAAAGTGGATGACTTCTACTATAAGCGTTCGAAAGATCGTTATATACACGTGGCTTTGTAA
Upstream 100 bases:
>100_bases ATATTTGACCTTGAGGTGAAACTGTCTCGCCACAGGCTGACATGGATTGCGACCACTCTCTTTATGATGACTAACAAGTT ATAAAGTAAAGGGGAACCGA
Downstream 100 bases:
>100_bases ACAAAAAACAGCGAGCACTTTGGCTCGCTGTTTTGCTTGTTGTTTGATGAAGTTTGTTCTGGGTTAAAAAGGAGAAGTTA AACCGTAAAGCGGTTTAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSKRFSFTIVGMMFSLGMFSAEVAAHPKHHHKHGHHHGHHHHHHKHKHKKVVVVKHKRPKHHYYHYKHIPPRGTYIQIGN FTYLKVDDFYYKRSKDRYIHVAL
Sequences:
>Translated_103_residues MSKRFSFTIVGMMFSLGMFSAEVAAHPKHHHKHGHHHGHHHHHHKHKHKKVVVVKHKRPKHHYYHYKHIPPRGTYIQIGN FTYLKVDDFYYKRSKDRYIHVAL >Mature_102_residues SKRFSFTIVGMMFSLGMFSAEVAAHPKHHHKHGHHHGHHHHHHKHKHKKVVVVKHKRPKHHYYHYKHIPPRGTYIQIGNF TYLKVDDFYYKRSKDRYIHVAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12493; Mature: 12361
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRFSFTIVGMMFSLGMFSAEVAAHPKHHHKHGHHHGHHHHHHKHKHKKVVVVKHKRPK CCCEEEEEHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC HHYYHYKHIPPRGTYIQIGNFTYLKVDDFYYKRSKDRYIHVAL CCCEEEEECCCCCCEEEECCEEEEEECCEEEECCCCCEEEEEC >Mature Secondary Structure SKRFSFTIVGMMFSLGMFSAEVAAHPKHHHKHGHHHGHHHHHHKHKHKKVVVVKHKRPK CCEEEEEHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC HHYYHYKHIPPRGTYIQIGNFTYLKVDDFYYKRSKDRYIHVAL CCCEEEEECCCCCCEEEECCEEEEEECCEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA