Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977522

Identifier: 156977522

GI number: 156977522

Start: 1486054

End: 1486701

Strand: Direct

Name: 156977522

Synonym: VIBHAR_06310

Alternate gene names: NA

Gene position: 1486054-1486701 (Clockwise)

Preceding gene: 156977521

Following gene: 156977523

Centisome position: 67.42

GC content: 48.15

Gene sequence:

>648_bases
GTGGAATATGGCGCCTTTCTGCTTGCTCTCCTAGCAGGCTGCGTCAATGCCGTAGGTCTTCTCGGCTTTCAACATCAAGC
GATAACGCATCTCTCCGGAACCGTAACTCAGCTAGGGAATAGCTTACTAACAGGTGTGGACTCAACCATCCACCTGCTTT
TTATTGTATTCAGCTTTTTGATTGGCTCTGCGTTTAGCGGATTCTTTATCGAAAGTAGCGCTCTAAAGCTCGGCCGCCGC
TATGGTGTGGCACTATGTATCGAAGGTAGCTTACTACTTTTGAGCTTGGGCTTTTTAGTACAAGGTAACGTGTATGGTCA
GTACCTTGCTTCTGCAGCCTGTGGTTTGCAGAATGCGATGATAACCACCTTCAGCGGTGCCGTTGTAAGGACGACACACA
TGACTGGCATCATTACCGACCTAGGTATCATGATTGGAGAAAGCCTACGTGGACGTCAATTCGACCGACGTAAAGCCAAA
CTGTTTATCTTCATTTTCTTTGGCTTCTTACTCGGTGGTACGGTTGGTGCTGGTTTGTTTAACGTTTTTGAACTGTACGC
ATTAGCCTTCCCTGCGCTTCTCGCTTTCGTTATCGCTATCGCATACTGGGGCTACCTCTACCTACAGAGCCGCCATCAAC
CAGTCTAG

Upstream 100 bases:

>100_bases
CGAGTACTGGGAGAAAGACTTTCGTTCCGCGCCACGAGCGTTATAATCTGCTCCTAACATTTGGTGAGGTTTTATTGTGA
TTTCCAGACTTCCTCGTTGG

Downstream 100 bases:

>100_bases
CTTTTATCTGACGGTTTAAGCATTTTACTTAAGCCGTCACTCTCTTCGCTTTCTTCACTCTTCATATCCATTAAACGAAC
GCCATCAAATGGGCTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MEYGAFLLALLAGCVNAVGLLGFQHQAITHLSGTVTQLGNSLLTGVDSTIHLLFIVFSFLIGSAFSGFFIESSALKLGRR
YGVALCIEGSLLLLSLGFLVQGNVYGQYLASAACGLQNAMITTFSGAVVRTTHMTGIITDLGIMIGESLRGRQFDRRKAK
LFIFIFFGFLLGGTVGAGLFNVFELYALAFPALLAFVIAIAYWGYLYLQSRHQPV

Sequences:

>Translated_215_residues
MEYGAFLLALLAGCVNAVGLLGFQHQAITHLSGTVTQLGNSLLTGVDSTIHLLFIVFSFLIGSAFSGFFIESSALKLGRR
YGVALCIEGSLLLLSLGFLVQGNVYGQYLASAACGLQNAMITTFSGAVVRTTHMTGIITDLGIMIGESLRGRQFDRRKAK
LFIFIFFGFLLGGTVGAGLFNVFELYALAFPALLAFVIAIAYWGYLYLQSRHQPV
>Mature_215_residues
MEYGAFLLALLAGCVNAVGLLGFQHQAITHLSGTVTQLGNSLLTGVDSTIHLLFIVFSFLIGSAFSGFFIESSALKLGRR
YGVALCIEGSLLLLSLGFLVQGNVYGQYLASAACGLQNAMITTFSGAVVRTTHMTGIITDLGIMIGESLRGRQFDRRKAK
LFIFIFFGFLLGGTVGAGLFNVFELYALAFPALLAFVIAIAYWGYLYLQSRHQPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23141; Mature: 23141

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYGAFLLALLAGCVNAVGLLGFQHQAITHLSGTVTQLGNSLLTGVDSTIHLLFIVFSFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
IGSAFSGFFIESSALKLGRRYGVALCIEGSLLLLSLGFLVQGNVYGQYLASAACGLQNAM
HHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ITTFSGAVVRTTHMTGIITDLGIMIGESLRGRQFDRRKAKLFIFIFFGFLLGGTVGAGLF
HHHHCCHHEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVFELYALAFPALLAFVIAIAYWGYLYLQSRHQPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEYGAFLLALLAGCVNAVGLLGFQHQAITHLSGTVTQLGNSLLTGVDSTIHLLFIVFSFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
IGSAFSGFFIESSALKLGRRYGVALCIEGSLLLLSLGFLVQGNVYGQYLASAACGLQNAM
HHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ITTFSGAVVRTTHMTGIITDLGIMIGESLRGRQFDRRKAKLFIFIFFGFLLGGTVGAGLF
HHHHCCHHEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVFELYALAFPALLAFVIAIAYWGYLYLQSRHQPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA