Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977521

Identifier: 156977521

GI number: 156977521

Start: 1485448

End: 1485849

Strand: Direct

Name: 156977521

Synonym: VIBHAR_06309

Alternate gene names: NA

Gene position: 1485448-1485849 (Clockwise)

Preceding gene: 156977520

Following gene: 156977522

Centisome position: 67.4

GC content: 47.26

Gene sequence:

>402_bases
ATGACAAAAATCACCCACACATGTGAATGTGCCTGTGGCTTAGTCCAACTGCGTTGCACGGCGGAGCCCATTCGCACCTC
TATTTGCCACTGTTTTGAATGCCAAAAGCGAACCGGAAGCGTATTCGGCGTTCAAGCTCGATTTAACAAAAACCAAGTCA
TCCTAGATGGTGACATCACCAGTTACACTCGTATTGCTGATTCAGGTCATCACGTTCAATATGACTTCTGCCCGGCATGC
GGCACAACCATGCGCTTACAGCTATCGGACGCTCCCGATTACGCAATCATTCCAATGGGACTGTTTAATAACAAAGAGTT
TCCAGAACCCACGGTTTCTATCTATGAACAAAGGAAGCATGGCTGGGTAAGCTTTGATTGTACGATGGAACACGCAGGTT
GA

Upstream 100 bases:

>100_bases
CAATTCACCGACCAAGACCTCAACACCTGACCGCTCATTTTGACTCAAGTGTTTCAAAATTAAACTAAACTATTTGTTGG
GCAACCAATAGGTAATAACG

Downstream 100 bases:

>100_bases
GTGGCAACGCCATATTAAGAAAACAAACATGCAACATGTCTCTCCCGCTCAAAGTTTGAGAACATCATTCAACAAAAGTT
GAGATTTTATTGAGAATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Lipoprotein

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MTKITHTCECACGLVQLRCTAEPIRTSICHCFECQKRTGSVFGVQARFNKNQVILDGDITSYTRIADSGHHVQYDFCPAC
GTTMRLQLSDAPDYAIIPMGLFNNKEFPEPTVSIYEQRKHGWVSFDCTMEHAG

Sequences:

>Translated_133_residues
MTKITHTCECACGLVQLRCTAEPIRTSICHCFECQKRTGSVFGVQARFNKNQVILDGDITSYTRIADSGHHVQYDFCPAC
GTTMRLQLSDAPDYAIIPMGLFNNKEFPEPTVSIYEQRKHGWVSFDCTMEHAG
>Mature_132_residues
TKITHTCECACGLVQLRCTAEPIRTSICHCFECQKRTGSVFGVQARFNKNQVILDGDITSYTRIADSGHHVQYDFCPACG
TTMRLQLSDAPDYAIIPMGLFNNKEFPEPTVSIYEQRKHGWVSFDCTMEHAG

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14942; Mature: 14811

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
7.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKITHTCECACGLVQLRCTAEPIRTSICHCFECQKRTGSVFGVQARFNKNQVILDGDIT
CCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCC
SYTRIADSGHHVQYDFCPACGTTMRLQLSDAPDYAIIPMGLFNNKEFPEPTVSIYEQRKH
CEEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHCCC
GWVSFDCTMEHAG
CCEEEEEEECCCC
>Mature Secondary Structure 
TKITHTCECACGLVQLRCTAEPIRTSICHCFECQKRTGSVFGVQARFNKNQVILDGDIT
CCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCC
SYTRIADSGHHVQYDFCPACGTTMRLQLSDAPDYAIIPMGLFNNKEFPEPTVSIYEQRKH
CEEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHCCC
GWVSFDCTMEHAG
CCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA