| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977521
Identifier: 156977521
GI number: 156977521
Start: 1485448
End: 1485849
Strand: Direct
Name: 156977521
Synonym: VIBHAR_06309
Alternate gene names: NA
Gene position: 1485448-1485849 (Clockwise)
Preceding gene: 156977520
Following gene: 156977522
Centisome position: 67.4
GC content: 47.26
Gene sequence:
>402_bases ATGACAAAAATCACCCACACATGTGAATGTGCCTGTGGCTTAGTCCAACTGCGTTGCACGGCGGAGCCCATTCGCACCTC TATTTGCCACTGTTTTGAATGCCAAAAGCGAACCGGAAGCGTATTCGGCGTTCAAGCTCGATTTAACAAAAACCAAGTCA TCCTAGATGGTGACATCACCAGTTACACTCGTATTGCTGATTCAGGTCATCACGTTCAATATGACTTCTGCCCGGCATGC GGCACAACCATGCGCTTACAGCTATCGGACGCTCCCGATTACGCAATCATTCCAATGGGACTGTTTAATAACAAAGAGTT TCCAGAACCCACGGTTTCTATCTATGAACAAAGGAAGCATGGCTGGGTAAGCTTTGATTGTACGATGGAACACGCAGGTT GA
Upstream 100 bases:
>100_bases CAATTCACCGACCAAGACCTCAACACCTGACCGCTCATTTTGACTCAAGTGTTTCAAAATTAAACTAAACTATTTGTTGG GCAACCAATAGGTAATAACG
Downstream 100 bases:
>100_bases GTGGCAACGCCATATTAAGAAAACAAACATGCAACATGTCTCTCCCGCTCAAAGTTTGAGAACATCATTCAACAAAAGTT GAGATTTTATTGAGAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Lipoprotein
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTKITHTCECACGLVQLRCTAEPIRTSICHCFECQKRTGSVFGVQARFNKNQVILDGDITSYTRIADSGHHVQYDFCPAC GTTMRLQLSDAPDYAIIPMGLFNNKEFPEPTVSIYEQRKHGWVSFDCTMEHAG
Sequences:
>Translated_133_residues MTKITHTCECACGLVQLRCTAEPIRTSICHCFECQKRTGSVFGVQARFNKNQVILDGDITSYTRIADSGHHVQYDFCPAC GTTMRLQLSDAPDYAIIPMGLFNNKEFPEPTVSIYEQRKHGWVSFDCTMEHAG >Mature_132_residues TKITHTCECACGLVQLRCTAEPIRTSICHCFECQKRTGSVFGVQARFNKNQVILDGDITSYTRIADSGHHVQYDFCPACG TTMRLQLSDAPDYAIIPMGLFNNKEFPEPTVSIYEQRKHGWVSFDCTMEHAG
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14942; Mature: 14811
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 7.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKITHTCECACGLVQLRCTAEPIRTSICHCFECQKRTGSVFGVQARFNKNQVILDGDIT CCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCC SYTRIADSGHHVQYDFCPACGTTMRLQLSDAPDYAIIPMGLFNNKEFPEPTVSIYEQRKH CEEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHCCC GWVSFDCTMEHAG CCEEEEEEECCCC >Mature Secondary Structure TKITHTCECACGLVQLRCTAEPIRTSICHCFECQKRTGSVFGVQARFNKNQVILDGDIT CCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCC SYTRIADSGHHVQYDFCPACGTTMRLQLSDAPDYAIIPMGLFNNKEFPEPTVSIYEQRKH CEEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHCCC GWVSFDCTMEHAG CCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA