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The map label for this gene is foxA [H]

Identifier: 156977512

GI number: 156977512

Start: 1476032

End: 1478179

Strand: Reverse

Name: foxA [H]

Synonym: VIBHAR_06299

Alternate gene names: 156977512

Gene position: 1478179-1476032 (Counterclockwise)

Preceding gene: 156977513

Following gene: 156977511

Centisome position: 67.07

GC content: 43.02

Gene sequence:

>2148_bases
ATGACCACTCACGTTCGTTTTAAGTATTCATCACTGGCAGTTGCGTTGTTGACTGCATTTTCCACGCAGGTTTTAGCAGA
AGAAGCTATTACAGCGACAGATTCGAATATAGAAACTATCACTGTTTTAGGGAAAGCTTATCGTAATACAGCGACTAAGT
CGGCACTTGAGCCAGAAGAAACGCCTCAAGGTATTACCGTTATTGATGAAGAGCAGTTAGAACAACGAGGTGTTAAGTCC
CTCAACCAAGCGCTCAGATATGCTCCGGGTGTTGTAACTGAACAGAAGGGCGCATCAGTAACCATGTACGATACGTTTTC
TATTCGTGGTTTTAGTAACAACCAAAGCTATTACGATGGTTTAGTGCTTCCGTTCCTAACCGGTTGGAATCTACAACCTC
AGATAGATCCTATTGCGATTCAGCAAGTTGAAGTATTTAAGGGTCCTACATCTGTGTTGTATGGAGCGATGCCACCAGGC
GGTATGGTCAACATGATTGCGAAGACACCGCAAGAAGATGGGTCGACGAAAGTTGGTGTATCTACAGGTTCAAGGAACCT
TATGGAAGCGTCAATTGATACTACAGGTCAATTAGGTGACAGTGATTTTTCTTATCGCTTTTTAGCACTTGCCCGTAAAC
AAGACAGCCAAGTAGTTCACGCAGAAGAAGAGCGCTATGTGATTGCTCCTTCACTAGATTGGCAGTTGTCTGATAGAACA
CTTATCAACTTCAACCTTTACTATCAGAACGATCCATCAATGGGTACTAACTCTGCTATGCCATTAGAAGTGCTGAAGGC
GAGTGATCCATCTGTGTCCATGGGTGACAAGAATTGGAGTACCTTTGAACGTGAAGTCTTGATGCTAGGCTATAAGATCA
ATCACCAAATTAACGATGATTGGACTTTCCTGCAGAATGCTCGCTATACCGATGCGTCTCTGTACCAAGAGAATACTTAC
CACACCGCGACTAACTTCAATCCTGTGACGGGCAGTTTAATCCGAAATGTTTACAGTACAGATGAGGATTCACAGAGCTT
TGTTATCGATAACCAAGTTTCAGGTCGTGTCGAAATTGGTGGTTTAGAACACAATTTATTATTCGGTGTCGACTACCTAA
AGCTAACAGGTGATTCTCTGTACAAAGAATTTACTGCGAATGCGAGTTTCTATGGGTTTGATGCTTATAATCCGAACAAT
GACCTTTTGGATAGAAGTCAGCTTCAAGAAAACTACCGTGAATCTCATGATATTACGACCGAACAGTTAGGTTTGTACTT
CCAAGATCAAGTTCGTTATGACGCATTGGTTTTATTAGCTGGTGGACGTTATGACATGTTTAAGGCAAGCGATGACAAAA
ATAGTTCTTACCCAACTTATGATGGAAAAGATGAAGCTGATCACAACCAGTTCTCGTACCGTGTAGGTGCTTTGTATGAG
CTAGATAATGGTATTTCTCCTTTTGTAAGTTACGCGACGAGCTTTGAGCCAGCTGCTGGTACTGATATTAACGGCAACTC
TTTAAAACCTCAGCTAGGTGAACAGATCGAGTTGGGTATTAAATACTTGTCTCCAGATATGTCACAGCAGGTTACTGCTT
CTTACTTCCATATCACTAAGAAAGACTCAATTGCTGCAGATCCATCAGATCCTACATACCGTTCTAAGATTCAGCTAGGT
GAGGTGCGCTCGCAAGGTATGGAGCTTGAGGGCAGATGGTTTGTAACTGAAGATTGGGATGTTAATGCGAGCTACACGTA
TATCGACATGGAAGTGACGGAAGATGCGAATCCAGATCTAGAAGGCACTACACCAATCTATGTACCGACACATGCCGCTA
ACCTATGGAGCAATTACTATGTCTATGGTGGTGCTTTATCGGGAACCCGCTTCAGTGTAGGTGCTCGTTACACTGGTGAA
ATGGAGATGGATGCAACGAATACTCAAGGCAAAGTGCCTTCTTACACAGTCGTCGATCTTTCAGTAGGTTATGACTTAGG
TGAGGCAAGCGACACACTATCTGGTGCAACAGCTAACTTGCTAGTGAACAACCTATTCGATGAAGAGTACTACACCTGTT
ACGACCGTTCTAACTGCTGGTTTGGTGCAGAGCAATCTGTAGAGCTTAGTGTGAACTATGAGTTCTAA

Upstream 100 bases:

>100_bases
TTGGAATTTGCACCAAATTGTTAATTATCCCTTTTATAGATACATACAATGCAAATGAGATTTATTACTATTTAAGTTAA
GCATTGGTACCGAGGGAATC

Downstream 100 bases:

>100_bases
CTAGGTTAAGAATATCACGACAAAAGCAGCCTTAATTCGGCTGCTTTTGTCGTTTGAACAAATATCGAATTTAGATTAAG
TAGGCAAATATATGAGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 715; Mature: 714

Protein sequence:

>715_residues
MTTHVRFKYSSLAVALLTAFSTQVLAEEAITATDSNIETITVLGKAYRNTATKSALEPEETPQGITVIDEEQLEQRGVKS
LNQALRYAPGVVTEQKGASVTMYDTFSIRGFSNNQSYYDGLVLPFLTGWNLQPQIDPIAIQQVEVFKGPTSVLYGAMPPG
GMVNMIAKTPQEDGSTKVGVSTGSRNLMEASIDTTGQLGDSDFSYRFLALARKQDSQVVHAEEERYVIAPSLDWQLSDRT
LINFNLYYQNDPSMGTNSAMPLEVLKASDPSVSMGDKNWSTFEREVLMLGYKINHQINDDWTFLQNARYTDASLYQENTY
HTATNFNPVTGSLIRNVYSTDEDSQSFVIDNQVSGRVEIGGLEHNLLFGVDYLKLTGDSLYKEFTANASFYGFDAYNPNN
DLLDRSQLQENYRESHDITTEQLGLYFQDQVRYDALVLLAGGRYDMFKASDDKNSSYPTYDGKDEADHNQFSYRVGALYE
LDNGISPFVSYATSFEPAAGTDINGNSLKPQLGEQIELGIKYLSPDMSQQVTASYFHITKKDSIAADPSDPTYRSKIQLG
EVRSQGMELEGRWFVTEDWDVNASYTYIDMEVTEDANPDLEGTTPIYVPTHAANLWSNYYVYGGALSGTRFSVGARYTGE
MEMDATNTQGKVPSYTVVDLSVGYDLGEASDTLSGATANLLVNNLFDEEYYTCYDRSNCWFGAEQSVELSVNYEF

Sequences:

>Translated_715_residues
MTTHVRFKYSSLAVALLTAFSTQVLAEEAITATDSNIETITVLGKAYRNTATKSALEPEETPQGITVIDEEQLEQRGVKS
LNQALRYAPGVVTEQKGASVTMYDTFSIRGFSNNQSYYDGLVLPFLTGWNLQPQIDPIAIQQVEVFKGPTSVLYGAMPPG
GMVNMIAKTPQEDGSTKVGVSTGSRNLMEASIDTTGQLGDSDFSYRFLALARKQDSQVVHAEEERYVIAPSLDWQLSDRT
LINFNLYYQNDPSMGTNSAMPLEVLKASDPSVSMGDKNWSTFEREVLMLGYKINHQINDDWTFLQNARYTDASLYQENTY
HTATNFNPVTGSLIRNVYSTDEDSQSFVIDNQVSGRVEIGGLEHNLLFGVDYLKLTGDSLYKEFTANASFYGFDAYNPNN
DLLDRSQLQENYRESHDITTEQLGLYFQDQVRYDALVLLAGGRYDMFKASDDKNSSYPTYDGKDEADHNQFSYRVGALYE
LDNGISPFVSYATSFEPAAGTDINGNSLKPQLGEQIELGIKYLSPDMSQQVTASYFHITKKDSIAADPSDPTYRSKIQLG
EVRSQGMELEGRWFVTEDWDVNASYTYIDMEVTEDANPDLEGTTPIYVPTHAANLWSNYYVYGGALSGTRFSVGARYTGE
MEMDATNTQGKVPSYTVVDLSVGYDLGEASDTLSGATANLLVNNLFDEEYYTCYDRSNCWFGAEQSVELSVNYEF
>Mature_714_residues
TTHVRFKYSSLAVALLTAFSTQVLAEEAITATDSNIETITVLGKAYRNTATKSALEPEETPQGITVIDEEQLEQRGVKSL
NQALRYAPGVVTEQKGASVTMYDTFSIRGFSNNQSYYDGLVLPFLTGWNLQPQIDPIAIQQVEVFKGPTSVLYGAMPPGG
MVNMIAKTPQEDGSTKVGVSTGSRNLMEASIDTTGQLGDSDFSYRFLALARKQDSQVVHAEEERYVIAPSLDWQLSDRTL
INFNLYYQNDPSMGTNSAMPLEVLKASDPSVSMGDKNWSTFEREVLMLGYKINHQINDDWTFLQNARYTDASLYQENTYH
TATNFNPVTGSLIRNVYSTDEDSQSFVIDNQVSGRVEIGGLEHNLLFGVDYLKLTGDSLYKEFTANASFYGFDAYNPNND
LLDRSQLQENYRESHDITTEQLGLYFQDQVRYDALVLLAGGRYDMFKASDDKNSSYPTYDGKDEADHNQFSYRVGALYEL
DNGISPFVSYATSFEPAAGTDINGNSLKPQLGEQIELGIKYLSPDMSQQVTASYFHITKKDSIAADPSDPTYRSKIQLGE
VRSQGMELEGRWFVTEDWDVNASYTYIDMEVTEDANPDLEGTTPIYVPTHAANLWSNYYVYGGALSGTRFSVGARYTGEM
EMDATNTQGKVPSYTVVDLSVGYDLGEASDTLSGATANLLVNNLFDEEYYTCYDRSNCWFGAEQSVELSVNYEF

Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=757, Percent_Identity=32.892998678996, Blast_Score=366, Evalue=1e-102,
Organism=Escherichia coli, GI1787024, Length=777, Percent_Identity=24.3243243243243, Blast_Score=126, Evalue=5e-30,
Organism=Escherichia coli, GI1787344, Length=758, Percent_Identity=24.2744063324538, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1787723, Length=665, Percent_Identity=23.9097744360902, Blast_Score=83, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 79699; Mature: 79568

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHVRFKYSSLAVALLTAFSTQVLAEEAITATDSNIETITVLGKAYRNTATKSALEPEE
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCC
TPQGITVIDEEQLEQRGVKSLNQALRYAPGVVTEQKGASVTMYDTFSIRGFSNNQSYYDG
CCCCEEEECHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEEEEEEECCCCCHHCC
LVLPFLTGWNLQPQIDPIAIQQVEVFKGPTSVLYGAMPPGGMVNMIAKTPQEDGSTKVGV
EEEEHHCCCCCCCCCCCEEEEEEEECCCCCHHEEECCCCCCEEEHHHCCCCCCCCEEEEE
STGSRNLMEASIDTTGQLGDSDFSYRFLALARKQDSQVVHAEEERYVIAPSLDWQLSDRT
ECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEECCCCEEECCCE
LINFNLYYQNDPSMGTNSAMPLEVLKASDPSVSMGDKNWSTFEREVLMLGYKINHQINDD
EEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHEEEEEEEEEECCEECCC
WTFLQNARYTDASLYQENTYHTATNFNPVTGSLIRNVYSTDEDSQSFVIDNQVSGRVEIG
CCEECCCCCCCHHHEECCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCEEEEC
GLEHNLLFGVDYLKLTGDSLYKEFTANASFYGFDAYNPNNDLLDRSQLQENYRESHDITT
CCCCEEEEEEEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCH
EQLGLYFQDQVRYDALVLLAGGRYDMFKASDDKNSSYPTYDGKDEADHNQFSYRVGALYE
HHHCEEEECCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
LDNGISPFVSYATSFEPAAGTDINGNSLKPQLGEQIELGIKYLSPDMSQQVTASYFHITK
ECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHEECEEECCCCCHHHHEEEEEEEEC
KDSIAADPSDPTYRSKIQLGEVRSQGMELEGRWFVTEDWDVNASYTYIDMEVTEDANPDL
CCCCCCCCCCCCHHHEEEEHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCC
EGTTPIYVPTHAANLWSNYYVYGGALSGTRFSVGARYTGEMEMDATNTQGKVPSYTVVDL
CCCCEEEECCCHHHHCCCEEEEEEECCCCEEEECCEEECCEEECCCCCCCCCCCEEEEEE
SVGYDLGEASDTLSGATANLLVNNLFDEEYYTCYDRSNCWFGAEQSVELSVNYEF
EECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCEECCCCCEEEEEEECC
>Mature Secondary Structure 
TTHVRFKYSSLAVALLTAFSTQVLAEEAITATDSNIETITVLGKAYRNTATKSALEPEE
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCC
TPQGITVIDEEQLEQRGVKSLNQALRYAPGVVTEQKGASVTMYDTFSIRGFSNNQSYYDG
CCCCEEEECHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEEEEEEECCCCCHHCC
LVLPFLTGWNLQPQIDPIAIQQVEVFKGPTSVLYGAMPPGGMVNMIAKTPQEDGSTKVGV
EEEEHHCCCCCCCCCCCEEEEEEEECCCCCHHEEECCCCCCEEEHHHCCCCCCCCEEEEE
STGSRNLMEASIDTTGQLGDSDFSYRFLALARKQDSQVVHAEEERYVIAPSLDWQLSDRT
ECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEECCCCEEECCCE
LINFNLYYQNDPSMGTNSAMPLEVLKASDPSVSMGDKNWSTFEREVLMLGYKINHQINDD
EEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHEEEEEEEEEECCEECCC
WTFLQNARYTDASLYQENTYHTATNFNPVTGSLIRNVYSTDEDSQSFVIDNQVSGRVEIG
CCEECCCCCCCHHHEECCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCEEEEC
GLEHNLLFGVDYLKLTGDSLYKEFTANASFYGFDAYNPNNDLLDRSQLQENYRESHDITT
CCCCEEEEEEEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCH
EQLGLYFQDQVRYDALVLLAGGRYDMFKASDDKNSSYPTYDGKDEADHNQFSYRVGALYE
HHHCEEEECCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
LDNGISPFVSYATSFEPAAGTDINGNSLKPQLGEQIELGIKYLSPDMSQQVTASYFHITK
ECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHEECEEECCCCCHHHHEEEEEEEEC
KDSIAADPSDPTYRSKIQLGEVRSQGMELEGRWFVTEDWDVNASYTYIDMEVTEDANPDL
CCCCCCCCCCCCHHHEEEEHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCC
EGTTPIYVPTHAANLWSNYYVYGGALSGTRFSVGARYTGEMEMDATNTQGKVPSYTVVDL
CCCCEEEECCCHHHHCCCEEEEEEECCCCEEEECCEEECCEEECCCCCCCCCCCEEEEEE
SVGYDLGEASDTLSGATANLLVNNLFDEEYYTCYDRSNCWFGAEQSVELSVNYEF
EECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609; 10103258; 7642488 [H]