| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156977499
Identifier: 156977499
GI number: 156977499
Start: 1463684
End: 1463920
Strand: Reverse
Name: 156977499
Synonym: VIBHAR_06286
Alternate gene names: NA
Gene position: 1463920-1463684 (Counterclockwise)
Preceding gene: 156977501
Following gene: 156977497
Centisome position: 66.42
GC content: 26.58
Gene sequence:
>237_bases ATGAAAGTAAAAGGGAGAGGCTTTTTATCTTTTTTGATGTTTCTGTCTCACCTAGTTGACACTGTGTTTTTAAAAAAGTT CCTAATCATATTTCTTTACCCGAAATGTAACATTTTACTTATTGAATTTTTTACTATTTTCCTGATTAACAATGACTTAA TGTTTTATATATCCTTTGTGTGTAACAAAATGTTTCGTTTTTTAGGTATTATTTTCCGAATTTGTTTATCGATTTGA
Upstream 100 bases:
>100_bases CGATGACGCTTAAGGTAAACCGCGAAAATGAAAGATAGATTTCTGTTAAGTTATGATTTAATTGCATTTTTATTTCAAAT GCATAACCGCTCTCACATTC
Downstream 100 bases:
>100_bases GCTAAACGTTTGCCATTTATCTTTTTTCTTACATCTTTTCACTCTGCTCTGGGGAACTTCTGAAATACATTGATTGGTAG TTGTTAAGCAAAAGTGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MKVKGRGFLSFLMFLSHLVDTVFLKKFLIIFLYPKCNILLIEFFTIFLINNDLMFYISFVCNKMFRFLGIIFRICLSI
Sequences:
>Translated_78_residues MKVKGRGFLSFLMFLSHLVDTVFLKKFLIIFLYPKCNILLIEFFTIFLINNDLMFYISFVCNKMFRFLGIIFRICLSI >Mature_78_residues MKVKGRGFLSFLMFLSHLVDTVFLKKFLIIFLYPKCNILLIEFFTIFLINNDLMFYISFVCNKMFRFLGIIFRICLSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9361; Mature: 9361
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKGRGFLSFLMFLSHLVDTVFLKKFLIIFLYPKCNILLIEFFTIFLINNDLMFYISFV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH CNKMFRFLGIIFRICLSI HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVKGRGFLSFLMFLSHLVDTVFLKKFLIIFLYPKCNILLIEFFTIFLINNDLMFYISFV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH CNKMFRFLGIIFRICLSI HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA