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The map label for this gene is yrhP [H]

Identifier: 156977491

GI number: 156977491

Start: 1458814

End: 1459446

Strand: Reverse

Name: yrhP [H]

Synonym: VIBHAR_06278

Alternate gene names: 156977491

Gene position: 1459446-1458814 (Counterclockwise)

Preceding gene: 156977495

Following gene: 156977490

Centisome position: 66.22

GC content: 45.5

Gene sequence:

>633_bases
ATGATCGATTTATCTGTACTTCCTGTTTATCTCCCCGCCGTTGTTGCACTTCTTTTGTTGCCTGGACCTGACATGTTGCT
GATTGCTAGCTCTAGCATGAGCTATGGTAAGAAAGTCGGTTTGTTTGCGAGCTTGGGCAATGCGACGTCGGGTGTGATTT
TGACCCTATTGGCAGCAATGGGTGTCTCGACCTTGATTGCGATGAGCCCAATAGCGTTAAAAGTGCTTCATCTACTGGGT
GGCGCGTACTTACTAAAAATGGGCTGGGACTGTTTAAGAGCGGATGTTTCTGCTGCACCAGAGCTTGATCAGAAAAACAA
AATGGCATCGACTTACTATCAACGTGCTATGATAAGTAACCTGTTGAACCCTAAGGCGTTGGTGTTCTTCGTGATGTTTT
TACCTCAGTTTGTCTCTAGCAACATTACTGCATCTTCGGGTGAGCAAATGCTTGCGCTTGGTTTGCTGTTAAACGTACTC
GGTTTGCTATTCAACATCTTGCTGGTTGCTCTGGCAGGTACACTGGGTAAAGGGTTGTTGGAAAATGACAAATTCCGTAT
GTACCAAGGCAAACTGATGGGCTTGGTGTTCATTATCCTTGCGATATGGATGCTCAGTAGCTTTGCGATGTAA

Upstream 100 bases:

>100_bases
TCTATATTCTGAATTTTACTTATTGGGAAGATATTTGGTCTGGATGTTATCTATTCATTGGTATAAGATCCGCCGCCTGT
TTTTGAAAGCCAGTTCCACC

Downstream 100 bases:

>100_bases
AGTGTAGGAACAATCAGATTTTTATACAAAAGCCAGCACTCGCTGGCTTTTTGTTTTAGTATCGCACTGATTTCCAAGGA
GTGGCGGTATGAAACTTGAA

Product: putative threonine efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIDLSVLPVYLPAVVALLLLPGPDMLLIASSSMSYGKKVGLFASLGNATSGVILTLLAAMGVSTLIAMSPIALKVLHLLG
GAYLLKMGWDCLRADVSAAPELDQKNKMASTYYQRAMISNLLNPKALVFFVMFLPQFVSSNITASSGEQMLALGLLLNVL
GLLFNILLVALAGTLGKGLLENDKFRMYQGKLMGLVFIILAIWMLSSFAM

Sequences:

>Translated_210_residues
MIDLSVLPVYLPAVVALLLLPGPDMLLIASSSMSYGKKVGLFASLGNATSGVILTLLAAMGVSTLIAMSPIALKVLHLLG
GAYLLKMGWDCLRADVSAAPELDQKNKMASTYYQRAMISNLLNPKALVFFVMFLPQFVSSNITASSGEQMLALGLLLNVL
GLLFNILLVALAGTLGKGLLENDKFRMYQGKLMGLVFIILAIWMLSSFAM
>Mature_210_residues
MIDLSVLPVYLPAVVALLLLPGPDMLLIASSSMSYGKKVGLFASLGNATSGVILTLLAAMGVSTLIAMSPIALKVLHLLG
GAYLLKMGWDCLRADVSAAPELDQKNKMASTYYQRAMISNLLNPKALVFFVMFLPQFVSSNITASSGEQMLALGLLLNVL
GLLFNILLVALAGTLGKGLLENDKFRMYQGKLMGLVFIILAIWMLSSFAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=193, Percent_Identity=29.5336787564767, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI48994979, Length=135, Percent_Identity=35.5555555555556, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786522, Length=115, Percent_Identity=26.0869565217391, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22462; Mature: 22462

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLSVLPVYLPAVVALLLLPGPDMLLIASSSMSYGKKVGLFASLGNATSGVILTLLAAM
CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
GVSTLIAMSPIALKVLHLLGGAYLLKMGWDCLRADVSAAPELDQKNKMASTYYQRAMISN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LLNPKALVFFVMFLPQFVSSNITASSGEQMLALGLLLNVLGLLFNILLVALAGTLGKGLL
HCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENDKFRMYQGKLMGLVFIILAIWMLSSFAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDLSVLPVYLPAVVALLLLPGPDMLLIASSSMSYGKKVGLFASLGNATSGVILTLLAAM
CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
GVSTLIAMSPIALKVLHLLGGAYLLKMGWDCLRADVSAAPELDQKNKMASTYYQRAMISN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LLNPKALVFFVMFLPQFVSSNITASSGEQMLALGLLLNVLGLLFNILLVALAGTLGKGLL
HCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENDKFRMYQGKLMGLVFIILAIWMLSSFAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]