| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977400
Identifier: 156977400
GI number: 156977400
Start: 1367277
End: 1368824
Strand: Reverse
Name: 156977400
Synonym: VIBHAR_06187
Alternate gene names: NA
Gene position: 1368824-1367277 (Counterclockwise)
Preceding gene: 156977401
Following gene: 156977399
Centisome position: 62.11
GC content: 44.32
Gene sequence:
>1548_bases ATGAAAATGCAGCGATACCAGCATCAAAGTCTCCAACAACAACAAGGCGTCGCCGCGATATGGATGGGTTTATTGCTTGT TCCTATCATGGGGTTCACTTTTTGGGCTGTTGAGGGAACACGTTATGTTCAAGAGTCCAGCCGACTAAGGGATTCAGCGG AAGCTGCGGCAATGGCCGTAACGATTGAAGACCAACCGGGTGCAGCCCGTGCGCTGGCAACGAAGTATGTCGAAAACTAT GTGAGAGACATCAAGTCAACCAACCTTTCTGCTCAACGTTTTTATCAAGCGGAAGACAAGGGTACTGGTGCTCTTGAGTA TATCCAATACACAGTGAACGCCAGAACAACGCATGACTCTTGGTTTGCAAGCAGCTTTATCCCATCGTTTGATAAGCAGC AGGAATTAGCCGGACGATCGCTGGCAAGAAAGTACCCTGCTTATCTAGGGGATAACAACATTGATATCGTTTTCGTCTCG GACTTTTCTCGCTCGATGAATGATAAGTGGGGCTCAAGTTGGAACAAAAAAATTGACGATTTGAAAACCGCGATCGATCA GATATCAAACAATATTTTGTGTAAATCAACTCGACAAGAATATGTTGACGGAGAGTGGAAAGACGTTTGTGATGAACCGG GAGACGATACAACAAGTGACAAATTACTGAATCGTGTTGGATTTGTGCCGTTTAACGTTCGCACCAGAGAAATTGTGGCA GGTAATAGAGCCAATGCGACAAGCCAACTAAGTTACAAGAACGGGTACAAGGCTTACTTGTCACCTTATAGCTACAACGA TGTCGATTGGAACTACTGGCGCACGTATACATCAAGCGAAGTGAATAATTGTGCTTATTGGCAGTCGTACTGCCAAAACC CTCGGGCAGAAAATCACAATTATGCCAAGCGCATTCGTGACGTTCTCGAAGCAGATCGCTACGCCGTAGCTGATGTCTAC AACTATGTTGATTTGCCGACTTCAGTATCGACCATGTTTACTGATAAATCAGGATTAAAGGCTAATTTCTATGGTGTGAG CGGTACCCGACTGTTTAATGCTCATGGTTCTTCATATTCATCGCAATTTCATAACATTCAATTGTCGAACAAACTTTCAG ATTTGGACTCGATTAAGTCGATGTGGGCAGATGGCGGTACTGCTGCGTTTCAAGGCATATTAAGAGGATCTCAGGTTCTT CATGAAGGTGATCCAAACAGTTCCGACCAGGAAGAGCAGCAAGCGTACAACAAGAAAATCAAAATGCTGCTGATTTTAAG TGATGGTCAGGAAAGTCCAGACAACGGCATCCTCAAAGGTCTTGTGGACTGGGGGATGTGTGACAAAGCAAGGCAAGAGA TTCCGGGTTTATACATTGGGGTTATTGGTATCGACTTTCGCGCCTCCCAACAAAGTGGTTTTCAAGACTGCGTTGTTGAC CCTCGTGAAGACATTATTGATGTCTCTAACCTAGACGAATTAATTGAAAAGATTGAAGAACTTATCCGCAAAGGCTCAAA AACAAGCGGAATAACTAAGTTGTACTAG
Upstream 100 bases:
>100_bases TGCGAAGAGCAAAGCTCTTGGTTCAAACCTTTTTTCAATGGCGGCACAGGGACAACGGTCAAGATTGGCTCTTCTTCAAT CATGCCAGGGAGATAATGAA
Downstream 100 bases:
>100_bases AGGAAAATATGAAGAAGTTAGTCATTGGTGCAGTCGCTCTATCAACGCTGCCATTTAGCGTTGCCATTAAGGCGGAGGAA GGACTTAGCGTCTATTGCGA
Product: Flp pilus assembly protein TadG
Products: NA
Alternate protein names: TadG-Like Protein; Membrane Associated Secretion System Protein; Von Willebrand Factor Type A Domain Protein; Protein Tadg Associated With Flp Pilus Assembly
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MKMQRYQHQSLQQQQGVAAIWMGLLLVPIMGFTFWAVEGTRYVQESSRLRDSAEAAAMAVTIEDQPGAARALATKYVENY VRDIKSTNLSAQRFYQAEDKGTGALEYIQYTVNARTTHDSWFASSFIPSFDKQQELAGRSLARKYPAYLGDNNIDIVFVS DFSRSMNDKWGSSWNKKIDDLKTAIDQISNNILCKSTRQEYVDGEWKDVCDEPGDDTTSDKLLNRVGFVPFNVRTREIVA GNRANATSQLSYKNGYKAYLSPYSYNDVDWNYWRTYTSSEVNNCAYWQSYCQNPRAENHNYAKRIRDVLEADRYAVADVY NYVDLPTSVSTMFTDKSGLKANFYGVSGTRLFNAHGSSYSSQFHNIQLSNKLSDLDSIKSMWADGGTAAFQGILRGSQVL HEGDPNSSDQEEQQAYNKKIKMLLILSDGQESPDNGILKGLVDWGMCDKARQEIPGLYIGVIGIDFRASQQSGFQDCVVD PREDIIDVSNLDELIEKIEELIRKGSKTSGITKLY
Sequences:
>Translated_515_residues MKMQRYQHQSLQQQQGVAAIWMGLLLVPIMGFTFWAVEGTRYVQESSRLRDSAEAAAMAVTIEDQPGAARALATKYVENY VRDIKSTNLSAQRFYQAEDKGTGALEYIQYTVNARTTHDSWFASSFIPSFDKQQELAGRSLARKYPAYLGDNNIDIVFVS DFSRSMNDKWGSSWNKKIDDLKTAIDQISNNILCKSTRQEYVDGEWKDVCDEPGDDTTSDKLLNRVGFVPFNVRTREIVA GNRANATSQLSYKNGYKAYLSPYSYNDVDWNYWRTYTSSEVNNCAYWQSYCQNPRAENHNYAKRIRDVLEADRYAVADVY NYVDLPTSVSTMFTDKSGLKANFYGVSGTRLFNAHGSSYSSQFHNIQLSNKLSDLDSIKSMWADGGTAAFQGILRGSQVL HEGDPNSSDQEEQQAYNKKIKMLLILSDGQESPDNGILKGLVDWGMCDKARQEIPGLYIGVIGIDFRASQQSGFQDCVVD PREDIIDVSNLDELIEKIEELIRKGSKTSGITKLY >Mature_515_residues MKMQRYQHQSLQQQQGVAAIWMGLLLVPIMGFTFWAVEGTRYVQESSRLRDSAEAAAMAVTIEDQPGAARALATKYVENY VRDIKSTNLSAQRFYQAEDKGTGALEYIQYTVNARTTHDSWFASSFIPSFDKQQELAGRSLARKYPAYLGDNNIDIVFVS DFSRSMNDKWGSSWNKKIDDLKTAIDQISNNILCKSTRQEYVDGEWKDVCDEPGDDTTSDKLLNRVGFVPFNVRTREIVA GNRANATSQLSYKNGYKAYLSPYSYNDVDWNYWRTYTSSEVNNCAYWQSYCQNPRAENHNYAKRIRDVLEADRYAVADVY NYVDLPTSVSTMFTDKSGLKANFYGVSGTRLFNAHGSSYSSQFHNIQLSNKLSDLDSIKSMWADGGTAAFQGILRGSQVL HEGDPNSSDQEEQQAYNKKIKMLLILSDGQESPDNGILKGLVDWGMCDKARQEIPGLYIGVIGIDFRASQQSGFQDCVVD PREDIIDVSNLDELIEKIEELIRKGSKTSGITKLY
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58190; Mature: 58190
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMQRYQHQSLQQQQGVAAIWMGLLLVPIMGFTFWAVEGTRYVQESSRLRDSAEAAAMAV CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHEEEEE TIEDQPGAARALATKYVENYVRDIKSTNLSAQRFYQAEDKGTGALEYIQYTVNARTTHDS EEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCH WFASSFIPSFDKQQELAGRSLARKYPAYLGDNNIDIVFVSDFSRSMNDKWGSSWNKKIDD HHHHHHCCCCCHHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCHHHCHHCCCCHHHHHHH LKTAIDQISNNILCKSTRQEYVDGEWKDVCDEPGDDTTSDKLLNRVGFVPFNVRTREIVA HHHHHHHHCCCEEECCHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHCCCEECCCCHHEEC GNRANATSQLSYKNGYKAYLSPYSYNDVDWNYWRTYTSSEVNNCAYWQSYCQNPRAENHN CCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCHHHHHHHHCCCCCCCCH YAKRIRDVLEADRYAVADVYNYVDLPTSVSTMFTDKSGLKANFYGVSGTRLFNAHGSSYS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCEEEEECCCCEEEEECCCCCHH SQFHNIQLSNKLSDLDSIKSMWADGGTAAFQGILRGSQVLHEGDPNSSDQEEQQAYNKKI HHHHEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCE KMLLILSDGQESPDNGILKGLVDWGMCDKARQEIPGLYIGVIGIDFRASQQSGFQDCVVD EEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEEEEEEEEECCCCCCCHHHCCC PREDIIDVSNLDELIEKIEELIRKGSKTSGITKLY CHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEECC >Mature Secondary Structure MKMQRYQHQSLQQQQGVAAIWMGLLLVPIMGFTFWAVEGTRYVQESSRLRDSAEAAAMAV CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHEEEEE TIEDQPGAARALATKYVENYVRDIKSTNLSAQRFYQAEDKGTGALEYIQYTVNARTTHDS EEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCH WFASSFIPSFDKQQELAGRSLARKYPAYLGDNNIDIVFVSDFSRSMNDKWGSSWNKKIDD HHHHHHCCCCCHHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCHHHCHHCCCCHHHHHHH LKTAIDQISNNILCKSTRQEYVDGEWKDVCDEPGDDTTSDKLLNRVGFVPFNVRTREIVA HHHHHHHHCCCEEECCHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHCCCEECCCCHHEEC GNRANATSQLSYKNGYKAYLSPYSYNDVDWNYWRTYTSSEVNNCAYWQSYCQNPRAENHN CCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCHHHHHHHHCCCCCCCCH YAKRIRDVLEADRYAVADVYNYVDLPTSVSTMFTDKSGLKANFYGVSGTRLFNAHGSSYS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCEEEEECCCCEEEEECCCCCHH SQFHNIQLSNKLSDLDSIKSMWADGGTAAFQGILRGSQVLHEGDPNSSDQEEQQAYNKKI HHHHEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCE KMLLILSDGQESPDNGILKGLVDWGMCDKARQEIPGLYIGVIGIDFRASQQSGFQDCVVD EEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEEEEEEEEECCCCCCCHHHCCC PREDIIDVSNLDELIEKIEELIRKGSKTSGITKLY CHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA