Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977398

Identifier: 156977398

GI number: 156977398

Start: 1365107

End: 1366579

Strand: Reverse

Name: 156977398

Synonym: VIBHAR_06185

Alternate gene names: NA

Gene position: 1366579-1365107 (Counterclockwise)

Preceding gene: 156977399

Following gene: 156977397

Centisome position: 62.0

GC content: 42.36

Gene sequence:

>1473_bases
GTGAAGCGTCAAAAGAGTGGTGTGTTGGTGGGACAAATTGGTGTGGCGGTGGGTAAATCTAAAACGATAATAGCGATAAT
GGTAGGGGTAGCGAGGAGTGGTGTGGCCTCTGCTTCAGAGCTGATTAACTTTAACGAGCAAGATAAACTAAACAGCATTA
ATGCTACGTACGAACAAGAGTATAAAGCGCTCAATATTGATGAAACTATCTCGCATTACAACAAGTTAAGTGCTGAGATT
GAGTCGACCAAGATCAATTTGGCCAATAACGTCGAGATGATCAAATCGGATTCAAATCGTTTAAAAGATAAGTTAGTCGA
TGGCGTTTACGATGACTCGCTCATTCTCACTTTGCGTAATATGTCTGCCAAAGTAAACACCATGAAAAAGGAAATCGAAA
CGGCAGGGAAGTTGCTTGTTGAGACTAAACACCAGCTTTCAGAAGATCAACAAGCTGCCAGTCAGATAGAACGAGTGAAA
AATGACGCACTTCTCGTCCTCTACGAGAAGATCAAAGCTCGTCATTTTGATGAATCGAAACGCATCCTTCATGACTCCTA
CGATGGTAATTTGCAGTGTAACGTCGCTGAGAGTTTGTCGACCTGTGTAAACAGAAACCTTCCTTCCATTAAGAACGCCT
TCGTATTGAGTAAAGGCGGCTTGTCACGCATTCAACTCACGAGTTTTAGAGTAGTGGATGCAAACCAAAGATTAAATGGT
GACTTGTCTTTTACTGCAGACGCGAGCTACAAATACGCCTACAGTGCAAATACAGAAGTCGAGCTTAGACAGGCGTTAAA
CTTAGATAGAGTGCGCTTTGTATTTCGTTCAAACTCAAAAAATACGGTCTTCTACATCAACGAACAAGAAGTCGGTAGTG
GTGAAAGCGTCGATGTAACAGGCAATTACGTTGGGATTTATAGTGTGCGTGCGGTTAACAAAGACAAAACCCAGTCGCTT
AAACTCAACCTTAAGAATGGCGGTGATTACTTCTTTCCATTTTCAAAAAAGGCGAATCCAGAGCAAACGGCCCCGGCCAA
TTTAATTGCCGAAGAATCAAAGAATACGTATAGCGGCCAGAGTGATGCTCAAACCAATACAAAGTTTTCTGAGAGCCTGT
TGCCTTCTCGAGCAGTGGCGGAACTGAACACGACTAAAGCGCAAGATGTGAAACGTTATACCAACAAGGTGCTCTACAAA
GACGAAGCATTCACCTATTTATTGCCTAAATTCAAAGGAAACCAAAAGTCTCACGACATTTTCTTGAATCGTGAAGAGGC
GTCGCAATACTGTGAGCGTTTGTCCTCAAGTTTGCCGAGTAAAGCTGCTTATGAGTATTTGGAACAGTATGCCAACCTCG
CTGACGGAGATTATTGGACTGAACAAGGAAAAGTCTATTCATCGGTAAAACACCAAGAGCTAGATAAAGCGTTTGATAAG
AACAAGCTCGTTTGTATGGTGAGTATGAACTAA

Upstream 100 bases:

>100_bases
CGCAAAACAGACGATCAGAAGTATGGGTTTCAAAAAACGACTCAGTGAAAACTGAAGATTAGGATTCAATCACAACGCTT
CATCTTGCTAACGAAGTAGG

Downstream 100 bases:

>100_bases
ACGAAACAGTCCATAGACGATCGTCACCAAGAGCCACAGTTTGTGGCTCTTTTTATACCTCTATACCTCTATACCCAACG
GATCATAGCCTGAAGTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MKRQKSGVLVGQIGVAVGKSKTIIAIMVGVARSGVASASELINFNEQDKLNSINATYEQEYKALNIDETISHYNKLSAEI
ESTKINLANNVEMIKSDSNRLKDKLVDGVYDDSLILTLRNMSAKVNTMKKEIETAGKLLVETKHQLSEDQQAASQIERVK
NDALLVLYEKIKARHFDESKRILHDSYDGNLQCNVAESLSTCVNRNLPSIKNAFVLSKGGLSRIQLTSFRVVDANQRLNG
DLSFTADASYKYAYSANTEVELRQALNLDRVRFVFRSNSKNTVFYINEQEVGSGESVDVTGNYVGIYSVRAVNKDKTQSL
KLNLKNGGDYFFPFSKKANPEQTAPANLIAEESKNTYSGQSDAQTNTKFSESLLPSRAVAELNTTKAQDVKRYTNKVLYK
DEAFTYLLPKFKGNQKSHDIFLNREEASQYCERLSSSLPSKAAYEYLEQYANLADGDYWTEQGKVYSSVKHQELDKAFDK
NKLVCMVSMN

Sequences:

>Translated_490_residues
MKRQKSGVLVGQIGVAVGKSKTIIAIMVGVARSGVASASELINFNEQDKLNSINATYEQEYKALNIDETISHYNKLSAEI
ESTKINLANNVEMIKSDSNRLKDKLVDGVYDDSLILTLRNMSAKVNTMKKEIETAGKLLVETKHQLSEDQQAASQIERVK
NDALLVLYEKIKARHFDESKRILHDSYDGNLQCNVAESLSTCVNRNLPSIKNAFVLSKGGLSRIQLTSFRVVDANQRLNG
DLSFTADASYKYAYSANTEVELRQALNLDRVRFVFRSNSKNTVFYINEQEVGSGESVDVTGNYVGIYSVRAVNKDKTQSL
KLNLKNGGDYFFPFSKKANPEQTAPANLIAEESKNTYSGQSDAQTNTKFSESLLPSRAVAELNTTKAQDVKRYTNKVLYK
DEAFTYLLPKFKGNQKSHDIFLNREEASQYCERLSSSLPSKAAYEYLEQYANLADGDYWTEQGKVYSSVKHQELDKAFDK
NKLVCMVSMN
>Mature_490_residues
MKRQKSGVLVGQIGVAVGKSKTIIAIMVGVARSGVASASELINFNEQDKLNSINATYEQEYKALNIDETISHYNKLSAEI
ESTKINLANNVEMIKSDSNRLKDKLVDGVYDDSLILTLRNMSAKVNTMKKEIETAGKLLVETKHQLSEDQQAASQIERVK
NDALLVLYEKIKARHFDESKRILHDSYDGNLQCNVAESLSTCVNRNLPSIKNAFVLSKGGLSRIQLTSFRVVDANQRLNG
DLSFTADASYKYAYSANTEVELRQALNLDRVRFVFRSNSKNTVFYINEQEVGSGESVDVTGNYVGIYSVRAVNKDKTQSL
KLNLKNGGDYFFPFSKKANPEQTAPANLIAEESKNTYSGQSDAQTNTKFSESLLPSRAVAELNTTKAQDVKRYTNKVLYK
DEAFTYLLPKFKGNQKSHDIFLNREEASQYCERLSSSLPSKAAYEYLEQYANLADGDYWTEQGKVYSSVKHQELDKAFDK
NKLVCMVSMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54943; Mature: 54943

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQKSGVLVGQIGVAVGKSKTIIAIMVGVARSGVASASELINFNEQDKLNSINATYEQE
CCCCCCCEEEEEEEEEECCCCEEEEEEEHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHH
YKALNIDETISHYNKLSAEIESTKINLANNVEMIKSDSNRLKDKLVDGVYDDSLILTLRN
HCCCCHHHHHHHHHHHHCCHHHEEEEECCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEC
MSAKVNTMKKEIETAGKLLVETKHQLSEDQQAASQIERVKNDALLVLYEKIKARHFDESK
CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHH
RILHDSYDGNLQCNVAESLSTCVNRNLPSIKNAFVLSKGGLSRIQLTSFRVVDANQRLNG
HHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCC
DLSFTADASYKYAYSANTEVELRQALNLDRVRFVFRSNSKNTVFYINEQEVGSGESVDVT
CEEEEECCCEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEC
GNYVGIYSVRAVNKDKTQSLKLNLKNGGDYFFPFSKKANPEQTAPANLIAEESKNTYSGQ
CCEEEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCC
SDAQTNTKFSESLLPSRAVAELNTTKAQDVKRYTNKVLYKDEAFTYLLPKFKGNQKSHDI
CCCCCCCHHHHHHCCCHHHHHHCCHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCE
FLNREEASQYCERLSSSLPSKAAYEYLEQYANLADGDYWTEQGKVYSSVKHQELDKAFDK
EEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHCC
NKLVCMVSMN
CCEEEEEECC
>Mature Secondary Structure
MKRQKSGVLVGQIGVAVGKSKTIIAIMVGVARSGVASASELINFNEQDKLNSINATYEQE
CCCCCCCEEEEEEEEEECCCCEEEEEEEHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHH
YKALNIDETISHYNKLSAEIESTKINLANNVEMIKSDSNRLKDKLVDGVYDDSLILTLRN
HCCCCHHHHHHHHHHHHCCHHHEEEEECCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEC
MSAKVNTMKKEIETAGKLLVETKHQLSEDQQAASQIERVKNDALLVLYEKIKARHFDESK
CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHH
RILHDSYDGNLQCNVAESLSTCVNRNLPSIKNAFVLSKGGLSRIQLTSFRVVDANQRLNG
HHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCC
DLSFTADASYKYAYSANTEVELRQALNLDRVRFVFRSNSKNTVFYINEQEVGSGESVDVT
CEEEEECCCEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEC
GNYVGIYSVRAVNKDKTQSLKLNLKNGGDYFFPFSKKANPEQTAPANLIAEESKNTYSGQ
CCEEEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCC
SDAQTNTKFSESLLPSRAVAELNTTKAQDVKRYTNKVLYKDEAFTYLLPKFKGNQKSHDI
CCCCCCCHHHHHHCCCHHHHHHCCHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCE
FLNREEASQYCERLSSSLPSKAAYEYLEQYANLADGDYWTEQGKVYSSVKHQELDKAFDK
EEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHCC
NKLVCMVSMN
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA