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The map label for this gene is 156977391

Identifier: 156977391

GI number: 156977391

Start: 1356954

End: 1357883

Strand: Reverse

Name: 156977391

Synonym: VIBHAR_06178

Alternate gene names: NA

Gene position: 1357883-1356954 (Counterclockwise)

Preceding gene: 156977392

Following gene: 156977390

Centisome position: 61.61

GC content: 47.96

Gene sequence:

>930_bases
ATGACAAAAATCTTTTCATCTATCGCGCTGAGTGCAGTAGCGACAGGTGCTTACGCTAACCAATGTGAAACCGTTCGATT
TGCCGATGTAGGCTGGACGGACATTACAGCGACCACTGCTGTTACCTCTGAACTGTTAAAAGGCTTGGGCTACAAAACCA
AGACCGATCTTCTGTCTGTACCAGTGACGTACTCTTCAATGGCAAACGGCGACATTGACGTATTCCTAGGTAACTGGATG
CCAACCATGGAAGGCGATATCGCCAAGTACCGTGAAGCTGGCACAGTGGAAACCGTTCGCGCAAACCTTGAAGGCGCAAA
ATACACACTAGCTGTGCCAAAGTACGTGTATGACGCTGGCGTGAAAAGCTTTGCTGACTTGGCAAAAAATGCTGACAAAT
TTAAAGACCGCATCTACGGGATTGAGCCGGGCAACGATGGCAACCGTTTGATCCAAGATATGATCGACAGCGATGCATTC
GGCTTGAAAGACTTCAGCCTAGTGGAATCAAGCGAAGCGGGCATGGTGTCTCAAGTGTCTCGTGCAGTGCGCCGTAACCA
ATGGATCGTTTACCTAGGTTGGGCTCCGCACCCAATGAACAGCAATGTGGAGATGGAATACCTATCTGGCGGTGACGACT
TCTTTGGTCCTAACTACGGTGGTGCAAATGTCTACACCAATGTGCGCCAAGACTACCTATCTGAGTGTCAAAACGTGGGT
CAACTGCTTAAGAATCTAGAGTTCAGCTTAGAGATGGAAAACCAGTTGATGGAAGCGATTCTGAATCAAAAACAAAAGCC
AGCGAAAGCAGCGCAAGAATGGTTGAACGCTAACCCACAACAACTTGAAGCGTGGCTAGAAGGCGTTAAGACGCTGGACG
GCAAAGACGCAAAACAAGCGATTACTTCTTACCTAAAAACAAACGCTTAA

Upstream 100 bases:

>100_bases
AATGCGTCCGCCGAAAAGAGACTTAAGCTCGATCTCTTCTATCGCTTAATAACTCAAAGAAAAGTCAGTAATCATTACAA
GGAATTTAAACATGTCTACG

Downstream 100 bases:

>100_bases
TCATTCCTCTCTTTAGGAAAAGGTGGGTAGTGATGCCCACCTTTTAACACAAAGGTTTTATTGTGAATTTTATTACGGAC
AACAAACTTCCGTTGGGCGA

Product: glycine betaine/L-proline ABC transporter glycine betaine/L-proline-binding

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTKIFSSIALSAVATGAYANQCETVRFADVGWTDITATTAVTSELLKGLGYKTKTDLLSVPVTYSSMANGDIDVFLGNWM
PTMEGDIAKYREAGTVETVRANLEGAKYTLAVPKYVYDAGVKSFADLAKNADKFKDRIYGIEPGNDGNRLIQDMIDSDAF
GLKDFSLVESSEAGMVSQVSRAVRRNQWIVYLGWAPHPMNSNVEMEYLSGGDDFFGPNYGGANVYTNVRQDYLSECQNVG
QLLKNLEFSLEMENQLMEAILNQKQKPAKAAQEWLNANPQQLEAWLEGVKTLDGKDAKQAITSYLKTNA

Sequences:

>Translated_309_residues
MTKIFSSIALSAVATGAYANQCETVRFADVGWTDITATTAVTSELLKGLGYKTKTDLLSVPVTYSSMANGDIDVFLGNWM
PTMEGDIAKYREAGTVETVRANLEGAKYTLAVPKYVYDAGVKSFADLAKNADKFKDRIYGIEPGNDGNRLIQDMIDSDAF
GLKDFSLVESSEAGMVSQVSRAVRRNQWIVYLGWAPHPMNSNVEMEYLSGGDDFFGPNYGGANVYTNVRQDYLSECQNVG
QLLKNLEFSLEMENQLMEAILNQKQKPAKAAQEWLNANPQQLEAWLEGVKTLDGKDAKQAITSYLKTNA
>Mature_308_residues
TKIFSSIALSAVATGAYANQCETVRFADVGWTDITATTAVTSELLKGLGYKTKTDLLSVPVTYSSMANGDIDVFLGNWMP
TMEGDIAKYREAGTVETVRANLEGAKYTLAVPKYVYDAGVKSFADLAKNADKFKDRIYGIEPGNDGNRLIQDMIDSDAFG
LKDFSLVESSEAGMVSQVSRAVRRNQWIVYLGWAPHPMNSNVEMEYLSGGDDFFGPNYGGANVYTNVRQDYLSECQNVGQ
LLKNLEFSLEMENQLMEAILNQKQKPAKAAQEWLNANPQQLEAWLEGVKTLDGKDAKQAITSYLKTNA

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34035; Mature: 33903

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIFSSIALSAVATGAYANQCETVRFADVGWTDITATTAVTSELLKGLGYKTKTDLLSV
CCHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEC
PVTYSSMANGDIDVFLGNWMPTMEGDIAKYREAGTVETVRANLEGAKYTLAVPKYVYDAG
CEEHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCHHHHHHCCCCCEEEEECHHHHHHHH
VKSFADLAKNADKFKDRIYGIEPGNDGNRLIQDMIDSDAFGLKDFSLVESSEAGMVSQVS
HHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHH
RAVRRNQWIVYLGWAPHPMNSNVEMEYLSGGDDFFGPNYGGANVYTNVRQDYLSECQNVG
HHHHHCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QLLKNLEFSLEMENQLMEAILNQKQKPAKAAQEWLNANPQQLEAWLEGVKTLDGKDAKQA
HHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
ITSYLKTNA
HHHHHHCCC
>Mature Secondary Structure 
TKIFSSIALSAVATGAYANQCETVRFADVGWTDITATTAVTSELLKGLGYKTKTDLLSV
CHHHHHHHHHHHHHCHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEC
PVTYSSMANGDIDVFLGNWMPTMEGDIAKYREAGTVETVRANLEGAKYTLAVPKYVYDAG
CEEHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCHHHHHHCCCCCEEEEECHHHHHHHH
VKSFADLAKNADKFKDRIYGIEPGNDGNRLIQDMIDSDAFGLKDFSLVESSEAGMVSQVS
HHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHH
RAVRRNQWIVYLGWAPHPMNSNVEMEYLSGGDDFFGPNYGGANVYTNVRQDYLSECQNVG
HHHHHCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QLLKNLEFSLEMENQLMEAILNQKQKPAKAAQEWLNANPQQLEAWLEGVKTLDGKDAKQA
HHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
ITSYLKTNA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]