| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977372
Identifier: 156977372
GI number: 156977372
Start: 1335216
End: 1335734
Strand: Reverse
Name: 156977372
Synonym: VIBHAR_06158
Alternate gene names: NA
Gene position: 1335734-1335216 (Counterclockwise)
Preceding gene: 156977374
Following gene: 156977371
Centisome position: 60.6
GC content: 47.78
Gene sequence:
>519_bases ATGTGGAAAGGTTTATTGGCAACGCTGTTTGCTATCTCGCTGGTCGCTTGTACCACGGTAACGACCGATGTCGACAAGCA AGCGGATTTCTCATCCTACAAGACGTTTGATTTCGGTGAACAATCAGACACTCCAACCAGTTTGGATGCTCGTCGCATTG AGCAAGGGTTGGCGGCTCAACTGGAATCCAAAGGATTGTCGCGCGTGAAAAGCGGGGGGGATCTATACGTGCACCACGAC ATCATCAAGGAGTCGGAGATCGTATCTTCTGGTTCAAGCTTTAGTGTAGGTTACGGTTGGAACAGCTTTGGTGTGGTGAC GTCCAGTCCAGAGCGTTATAAGGAGAAGAAGTACGGCAAATTGGTCGTTGAGCTTGTCGATACTAAAGCCAATCAAGTGG TGTGGAAGGGGGTTTCTAGTCGTAAACTCACCGAGTCTATGAGTACTGAAAAGCGCGAAGAGTTGATTTCGGAAGAAGTC ACGAAAATGTTTGAAAACTACCCTTACGGCAAAGAGTAA
Upstream 100 bases:
>100_bases CAAGACTAAATGTTGAAATGATTCAATATTTTCTCAGGTTCGTAAGATTAAATACCACAACTTGCCGAGAGAGACCGGCG TGATAGAGAGGAGAAAGAGT
Downstream 100 bases:
>100_bases ATTCAAGGTTAGATTATCGTCTAATTGCGCCAATAATCATTTGCAAAACGCTCTTTTTATTATTGATTAAGAATTTGAAT TGCAAATTTGCACGCACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MWKGLLATLFAISLVACTTVTTDVDKQADFSSYKTFDFGEQSDTPTSLDARRIEQGLAAQLESKGLSRVKSGGDLYVHHD IIKESEIVSSGSSFSVGYGWNSFGVVTSSPERYKEKKYGKLVVELVDTKANQVVWKGVSSRKLTESMSTEKREELISEEV TKMFENYPYGKE
Sequences:
>Translated_172_residues MWKGLLATLFAISLVACTTVTTDVDKQADFSSYKTFDFGEQSDTPTSLDARRIEQGLAAQLESKGLSRVKSGGDLYVHHD IIKESEIVSSGSSFSVGYGWNSFGVVTSSPERYKEKKYGKLVVELVDTKANQVVWKGVSSRKLTESMSTEKREELISEEV TKMFENYPYGKE >Mature_172_residues MWKGLLATLFAISLVACTTVTTDVDKQADFSSYKTFDFGEQSDTPTSLDARRIEQGLAAQLESKGLSRVKSGGDLYVHHD IIKESEIVSSGSSFSVGYGWNSFGVVTSSPERYKEKKYGKLVVELVDTKANQVVWKGVSSRKLTESMSTEKREELISEEV TKMFENYPYGKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19161; Mature: 19161
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKGLLATLFAISLVACTTVTTDVDKQADFSSYKTFDFGEQSDTPTSLDARRIEQGLAAQ CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LESKGLSRVKSGGDLYVHHDIIKESEIVSSGSSFSVGYGWNSFGVVTSSPERYKEKKYGK HHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEECCCCCCCCCEECCHHHHHHHHHHH LVVELVDTKANQVVWKGVSSRKLTESMSTEKREELISEEVTKMFENYPYGKE HHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MWKGLLATLFAISLVACTTVTTDVDKQADFSSYKTFDFGEQSDTPTSLDARRIEQGLAAQ CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LESKGLSRVKSGGDLYVHHDIIKESEIVSSGSSFSVGYGWNSFGVVTSSPERYKEKKYGK HHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEECCCCCCCCCEECCHHHHHHHHHHH LVVELVDTKANQVVWKGVSSRKLTESMSTEKREELISEEVTKMFENYPYGKE HHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA