Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977372

Identifier: 156977372

GI number: 156977372

Start: 1335216

End: 1335734

Strand: Reverse

Name: 156977372

Synonym: VIBHAR_06158

Alternate gene names: NA

Gene position: 1335734-1335216 (Counterclockwise)

Preceding gene: 156977374

Following gene: 156977371

Centisome position: 60.6

GC content: 47.78

Gene sequence:

>519_bases
ATGTGGAAAGGTTTATTGGCAACGCTGTTTGCTATCTCGCTGGTCGCTTGTACCACGGTAACGACCGATGTCGACAAGCA
AGCGGATTTCTCATCCTACAAGACGTTTGATTTCGGTGAACAATCAGACACTCCAACCAGTTTGGATGCTCGTCGCATTG
AGCAAGGGTTGGCGGCTCAACTGGAATCCAAAGGATTGTCGCGCGTGAAAAGCGGGGGGGATCTATACGTGCACCACGAC
ATCATCAAGGAGTCGGAGATCGTATCTTCTGGTTCAAGCTTTAGTGTAGGTTACGGTTGGAACAGCTTTGGTGTGGTGAC
GTCCAGTCCAGAGCGTTATAAGGAGAAGAAGTACGGCAAATTGGTCGTTGAGCTTGTCGATACTAAAGCCAATCAAGTGG
TGTGGAAGGGGGTTTCTAGTCGTAAACTCACCGAGTCTATGAGTACTGAAAAGCGCGAAGAGTTGATTTCGGAAGAAGTC
ACGAAAATGTTTGAAAACTACCCTTACGGCAAAGAGTAA

Upstream 100 bases:

>100_bases
CAAGACTAAATGTTGAAATGATTCAATATTTTCTCAGGTTCGTAAGATTAAATACCACAACTTGCCGAGAGAGACCGGCG
TGATAGAGAGGAGAAAGAGT

Downstream 100 bases:

>100_bases
ATTCAAGGTTAGATTATCGTCTAATTGCGCCAATAATCATTTGCAAAACGCTCTTTTTATTATTGATTAAGAATTTGAAT
TGCAAATTTGCACGCACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MWKGLLATLFAISLVACTTVTTDVDKQADFSSYKTFDFGEQSDTPTSLDARRIEQGLAAQLESKGLSRVKSGGDLYVHHD
IIKESEIVSSGSSFSVGYGWNSFGVVTSSPERYKEKKYGKLVVELVDTKANQVVWKGVSSRKLTESMSTEKREELISEEV
TKMFENYPYGKE

Sequences:

>Translated_172_residues
MWKGLLATLFAISLVACTTVTTDVDKQADFSSYKTFDFGEQSDTPTSLDARRIEQGLAAQLESKGLSRVKSGGDLYVHHD
IIKESEIVSSGSSFSVGYGWNSFGVVTSSPERYKEKKYGKLVVELVDTKANQVVWKGVSSRKLTESMSTEKREELISEEV
TKMFENYPYGKE
>Mature_172_residues
MWKGLLATLFAISLVACTTVTTDVDKQADFSSYKTFDFGEQSDTPTSLDARRIEQGLAAQLESKGLSRVKSGGDLYVHHD
IIKESEIVSSGSSFSVGYGWNSFGVVTSSPERYKEKKYGKLVVELVDTKANQVVWKGVSSRKLTESMSTEKREELISEEV
TKMFENYPYGKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19161; Mature: 19161

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKGLLATLFAISLVACTTVTTDVDKQADFSSYKTFDFGEQSDTPTSLDARRIEQGLAAQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LESKGLSRVKSGGDLYVHHDIIKESEIVSSGSSFSVGYGWNSFGVVTSSPERYKEKKYGK
HHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEECCCCCCCCCEECCHHHHHHHHHHH
LVVELVDTKANQVVWKGVSSRKLTESMSTEKREELISEEVTKMFENYPYGKE
HHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MWKGLLATLFAISLVACTTVTTDVDKQADFSSYKTFDFGEQSDTPTSLDARRIEQGLAAQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LESKGLSRVKSGGDLYVHHDIIKESEIVSSGSSFSVGYGWNSFGVVTSSPERYKEKKYGK
HHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEECCCCCCCCCEECCHHHHHHHHHHH
LVVELVDTKANQVVWKGVSSRKLTESMSTEKREELISEEVTKMFENYPYGKE
HHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA