Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977325

Identifier: 156977325

GI number: 156977325

Start: 1272149

End: 1272547

Strand: Reverse

Name: 156977325

Synonym: VIBHAR_06111

Alternate gene names: NA

Gene position: 1272547-1272149 (Counterclockwise)

Preceding gene: 156977333

Following gene: 156977324

Centisome position: 57.74

GC content: 45.36

Gene sequence:

>399_bases
ATGGAAGCTAATATTCACGACGATCCAATATTGGTGGCAGGCAAGAGGATTCTGATTGCTCAAGCAATTTTGGGTCTGGT
ATTCATCGCGTATGAGTACATGCGAAGCGGCTCTCTCAGTGCTGAGTCAGCGATTACTGGGGTGCTTATCGCGATTCTTC
CATCTTTGTTCGGCATGGTATTCGCGTCCATTAAATCTAGGGTGAAACCAGAAGAGAGTTTGCGTGACCTCATGCATCTG
AGTCGAAATATCAAAGTCATTTACACCATTGTGATGTTTGTTTTGACGTTTCGATTTATGGCTCTTCGCAACATCGTGGT
CCTGATAGGCTTTTGTGTGACGATGTTTGGTCACTTCTTAACGCCGCTGTTCAGAGACCGCTTCGAAAGGAAGGCATAA

Upstream 100 bases:

>100_bases
ATTAAATTTATCTTAATGTAATTTGTTGTCACTAGACAGCTTTGTTTTGTGAAGTTTAATTATCAGAAGTTTAATTCGAA
ATTATTTTAAAGGGTGATTT

Downstream 100 bases:

>100_bases
ATGGAGACTGTCCAGTCCGCTCATGAATATATTGAGCACCACCTGACCTTTCTCACCGCCGGCGACGGTTGGTTTGGAAT
TAACCTTGATTCCATGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MEANIHDDPILVAGKRILIAQAILGLVFIAYEYMRSGSLSAESAITGVLIAILPSLFGMVFASIKSRVKPEESLRDLMHL
SRNIKVIYTIVMFVLTFRFMALRNIVVLIGFCVTMFGHFLTPLFRDRFERKA

Sequences:

>Translated_132_residues
MEANIHDDPILVAGKRILIAQAILGLVFIAYEYMRSGSLSAESAITGVLIAILPSLFGMVFASIKSRVKPEESLRDLMHL
SRNIKVIYTIVMFVLTFRFMALRNIVVLIGFCVTMFGHFLTPLFRDRFERKA
>Mature_132_residues
MEANIHDDPILVAGKRILIAQAILGLVFIAYEYMRSGSLSAESAITGVLIAILPSLFGMVFASIKSRVKPEESLRDLMHL
SRNIKVIYTIVMFVLTFRFMALRNIVVLIGFCVTMFGHFLTPLFRDRFERKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14925; Mature: 14925

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEANIHDDPILVAGKRILIAQAILGLVFIAYEYMRSGSLSAESAITGVLIAILPSLFGMV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FASIKSRVKPEESLRDLMHLSRNIKVIYTIVMFVLTFRFMALRNIVVLIGFCVTMFGHFL
HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLFRDRFERKA
HHHHHHHHHCCC
>Mature Secondary Structure
MEANIHDDPILVAGKRILIAQAILGLVFIAYEYMRSGSLSAESAITGVLIAILPSLFGMV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FASIKSRVKPEESLRDLMHLSRNIKVIYTIVMFVLTFRFMALRNIVVLIGFCVTMFGHFL
HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLFRDRFERKA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA