| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is yfaO [C]
Identifier: 156977243
GI number: 156977243
Start: 1211837
End: 1212250
Strand: Reverse
Name: yfaO [C]
Synonym: VIBHAR_06029
Alternate gene names: 156977243
Gene position: 1212250-1211837 (Counterclockwise)
Preceding gene: 156977246
Following gene: 156977242
Centisome position: 55.0
GC content: 43.48
Gene sequence:
>414_bases ATGAATAAACAAGTAAGAGTTGGAGTGGCGACCATCATCCTTCGTGATGGGGCAATATTACTCGGTGAGAGAGTTGGATC TCATGGTGCAAATACTTGGGCTACACCCGGCGGGCACCTTGAACTCGGTGAGAGTATAGAAGATTGTGCGAAGCGAGAAG TGCTTGAAGAAACGGGCCTAATCGTTGATTCAATAGAAAAGTTCACTTTTACGAATGATATCTTTGAGAAAGAAGGTAAG CACTACGTCACCTTGTTTGTCGTTGCATCGAGTGCCAGTGGCGAACCTCAAGTCACTGAGCCGGATAAATGTAAGCAGTG GAAATGGTGTCGGCTAGATGATTTACCAGAGCCACTGTTTCTACCGTTGATTAACTTACTTAAAGAAGATAATACGCTAG AAAACTTTGTATAA
Upstream 100 bases:
>100_bases ACTCATTACCACCCAAACTGGTTAAATTTTAACAGTGACAACTATCCTGCCAGAGGGGGAAGCTAATAAAGTGGACGTAG CGGTTTGAAATGGACGATAC
Downstream 100 bases:
>100_bases AGCAACTGTTTAGTTTGGCGTTAAATAGGTATCGAATGGTGTTTTTTGGTTCATTAAGGGGAATGTATGGCCCAAATCTA TTTCGTATGTGGCTTTATTG
Product: ADP-ribose pyrophosphatase MutT
Products: NA
Alternate protein names: MutT/Nudix Family Protein; ADP-Ribose Pyrophosphatase MutT; MutT/NUDIX Family Protein; ADP-Ribose Pyrophosphatase; MutT Like Protein; Hydrolase Protein MutT/Nudix Family; Mut Family Protein; NUDIX Family NudH Subfamily Hydrolase; MutT Protein
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MNKQVRVGVATIILRDGAILLGERVGSHGANTWATPGGHLELGESIEDCAKREVLEETGLIVDSIEKFTFTNDIFEKEGK HYVTLFVVASSASGEPQVTEPDKCKQWKWCRLDDLPEPLFLPLINLLKEDNTLENFV
Sequences:
>Translated_137_residues MNKQVRVGVATIILRDGAILLGERVGSHGANTWATPGGHLELGESIEDCAKREVLEETGLIVDSIEKFTFTNDIFEKEGK HYVTLFVVASSASGEPQVTEPDKCKQWKWCRLDDLPEPLFLPLINLLKEDNTLENFV >Mature_137_residues MNKQVRVGVATIILRDGAILLGERVGSHGANTWATPGGHLELGESIEDCAKREVLEETGLIVDSIEKFTFTNDIFEKEGK HYVTLFVVASSASGEPQVTEPDKCKQWKWCRLDDLPEPLFLPLINLLKEDNTLENFV
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8922792, Length=102, Percent_Identity=41.1764705882353, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.-.- [C]
Molecular weight: Translated: 15283; Mature: 15283
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQVRVGVATIILRDGAILLGERVGSHGANTWATPGGHLELGESIEDCAKREVLEETGL CCCCEEEHEEEEEEECCCEEEECHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC IVDSIEKFTFTNDIFEKEGKHYVTLFVVASSASGEPQVTEPDKCKQWKWCRLDDLPEPLF HHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LPLINLLKEDNTLENFV HHHHHHHHCCCCHHHCC >Mature Secondary Structure MNKQVRVGVATIILRDGAILLGERVGSHGANTWATPGGHLELGESIEDCAKREVLEETGL CCCCEEEHEEEEEEECCCEEEECHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC IVDSIEKFTFTNDIFEKEGKHYVTLFVVASSASGEPQVTEPDKCKQWKWCRLDDLPEPLF HHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LPLINLLKEDNTLENFV HHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA