Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977242

Identifier: 156977242

GI number: 156977242

Start: 1211291

End: 1211770

Strand: Reverse

Name: 156977242

Synonym: VIBHAR_06028

Alternate gene names: NA

Gene position: 1211770-1211291 (Counterclockwise)

Preceding gene: 156977243

Following gene: 156977241

Centisome position: 54.98

GC content: 42.29

Gene sequence:

>480_bases
ATGGCCCAAATCTATTTCGTATGTGGCTTTATTGGTTCTGGTAAAACAACGTATTCTAAAGCCCTTGCAGAAAAGCATGG
TGCTTTTCGTTTCTCTATCGATGAATGGATGATTCCTTTGTATGGCGAACACATGGAGCGTGAAGTCTTCGATAAACAAT
TGGCGACACTGCAGTGCCTCTTCAAAGAATCAGCGCAACAACTGTTTTCTCTCGGAGTCCCTGTTATTTTTGATTTCGGT
TTCTGGCGTAAGTCAGATAGAGAAAGCTTTATCAAATGGGCATCAGACGTTGGTATTGAGAGTGAAGTACATTATCTCGA
CGTCCCTTTTGATACATGTAAGCAAAGAGCCTCTCTGCGTAACGCAGACCTAAACAGTAAGTCTTATCATATGACACCAG
AAATGCTGGACCTATTTTGGTCTTGGTTCGAGATTCCAACGGACAGCGAAAATGTGACTTGGGTTAAACAAGCAGGGTAA

Upstream 100 bases:

>100_bases
TAAAGAAGATAATACGCTAGAAAACTTTGTATAAAGCAACTGTTTAGTTTGGCGTTAAATAGGTATCGAATGGTGTTTTT
TGGTTCATTAAGGGGAATGT

Downstream 100 bases:

>100_bases
GCATTTTGAGTAAAGAGATCATGGTTGCACCGTCTCCCGTCCCTCCAGTGCAATTTCCACATATACTAGGGGGTAGTATT
TTATACTTGGGGGGAGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAQIYFVCGFIGSGKTTYSKALAEKHGAFRFSIDEWMIPLYGEHMEREVFDKQLATLQCLFKESAQQLFSLGVPVIFDFG
FWRKSDRESFIKWASDVGIESEVHYLDVPFDTCKQRASLRNADLNSKSYHMTPEMLDLFWSWFEIPTDSENVTWVKQAG

Sequences:

>Translated_159_residues
MAQIYFVCGFIGSGKTTYSKALAEKHGAFRFSIDEWMIPLYGEHMEREVFDKQLATLQCLFKESAQQLFSLGVPVIFDFG
FWRKSDRESFIKWASDVGIESEVHYLDVPFDTCKQRASLRNADLNSKSYHMTPEMLDLFWSWFEIPTDSENVTWVKQAG
>Mature_158_residues
AQIYFVCGFIGSGKTTYSKALAEKHGAFRFSIDEWMIPLYGEHMEREVFDKQLATLQCLFKESAQQLFSLGVPVIFDFGF
WRKSDRESFIKWASDVGIESEVHYLDVPFDTCKQRASLRNADLNSKSYHMTPEMLDLFWSWFEIPTDSENVTWVKQAG

Specific function: Unknown

COG id: COG0645

COG function: function code R; Predicted kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18476; Mature: 18345

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIYFVCGFIGSGKTTYSKALAEKHGAFRFSIDEWMIPLYGEHMEREVFDKQLATLQCL
CCEEEEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHH
FKESAQQLFSLGVPVIFDFGFWRKSDRESFIKWASDVGIESEVHYLDVPFDTCKQRASLR
HHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHC
NADLNSKSYHMTPEMLDLFWSWFEIPTDSENVTWVKQAG
CCCCCCCCEECCHHHHHHHHHHHCCCCCCCCEEEEECCC
>Mature Secondary Structure 
AQIYFVCGFIGSGKTTYSKALAEKHGAFRFSIDEWMIPLYGEHMEREVFDKQLATLQCL
CEEEEEEEECCCCCHHHHHHHHHHCCCEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHH
FKESAQQLFSLGVPVIFDFGFWRKSDRESFIKWASDVGIESEVHYLDVPFDTCKQRASLR
HHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHC
NADLNSKSYHMTPEMLDLFWSWFEIPTDSENVTWVKQAG
CCCCCCCCEECCHHHHHHHHHHHCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA