Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is fecB [H]

Identifier: 156977221

GI number: 156977221

Start: 1193131

End: 1194027

Strand: Direct

Name: fecB [H]

Synonym: VIBHAR_06007

Alternate gene names: 156977221

Gene position: 1193131-1194027 (Clockwise)

Preceding gene: 156977219

Following gene: 156977222

Centisome position: 54.13

GC content: 47.49

Gene sequence:

>897_bases
ATGGGCCTTATCCATAGAGCAATCGCATTGGTGATGTGTACTCTCACCTCATTTGGATCTTTCGCGAATAATGAACGTTC
GGTCACAGATGAAAGAGGAACGTTCACGATCACAGGGACACCTCAACGCGTCGTTGCTTTGGAGTATTCTTTTGTCGATG
CCCTAGCCTCTGTCGGAGTTTCTCCTGTTGGCGTTGCGGATGATAAAGATGTAAACCGAATTCTTAAATCGATTCGAGAC
CAAGTGGCACCTTGGACTTCTGTTGGTATGCGCCCCCAGCCAAGCCTAGAAGTTATCTCTCAATTGAAGCCTGACCTTAT
CATTGCCGATGTTCAACGACATTCGTCTGCCTATGACGCTTTGTCTAAGATTGCCCCAACGCTGCTTCTGAAAAGCCGTG
GTGAGAACTATGAACAGAACCTAGATGCCGCAATGAAAATCGGTATTGTTCTAAACAAGGAACAAGAGATGAAGTCGCGC
ATTGAGCAACACAAAACGGTGATGGCTAAATTCAAGACGAAGTTTGCGAGCTCCGACACTATGCAGTTCGCGGTTGCAAC
AGAGAAAGGCATGTGGCTACATGGCCCAAAATCGTACGCGGGAAGCGTGTTAACTTGCCTAGGTATCCAGAGCCCAATTC
CAAATGAGACAGAGCGTGCTTACGTTGAAGTGAGCTTAGAGCAGCTGCTAAAAACCAACCCGGACTGGCTTCTGATCGGA
CCATACAGTGAGAACACCATCGCAGACACATGGAAACAGAGCCCTCTTTTCAATCTCCTTAACGCACGCAAGCGCCAACA
GGTTGTGAATGTTTCGCCACAAGCTTGGTCTCTTAACCGAGGTATGCATGCTGCCGAGCAAATCGCACAAGATCTTTCTG
AATTACTAAACAAATAG

Upstream 100 bases:

>100_bases
GTTACTATTGATATTACTTCTCAGTTGCACTAACATTCGCAACTTCTTCCTGTACGGACACACTTCCTTACAAATCAAAA
CTTCATAACGGAATAGTTAA

Downstream 100 bases:

>100_bases
ATGTCTTTTATTAATGTCATGCAAAGTAGAAAAGCGCTATTTGGCTGTTTCGTTGTTTTTTTAGCACTCAGTTTGGGGAC
GGTTGCATCTATGATCAGCT

Product: iron-dicitrate transporter substrate-binding subunit

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: Iron(III) dicitrate-binding periplasmic protein [H]

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MGLIHRAIALVMCTLTSFGSFANNERSVTDERGTFTITGTPQRVVALEYSFVDALASVGVSPVGVADDKDVNRILKSIRD
QVAPWTSVGMRPQPSLEVISQLKPDLIIADVQRHSSAYDALSKIAPTLLLKSRGENYEQNLDAAMKIGIVLNKEQEMKSR
IEQHKTVMAKFKTKFASSDTMQFAVATEKGMWLHGPKSYAGSVLTCLGIQSPIPNETERAYVEVSLEQLLKTNPDWLLIG
PYSENTIADTWKQSPLFNLLNARKRQQVVNVSPQAWSLNRGMHAAEQIAQDLSELLNK

Sequences:

>Translated_298_residues
MGLIHRAIALVMCTLTSFGSFANNERSVTDERGTFTITGTPQRVVALEYSFVDALASVGVSPVGVADDKDVNRILKSIRD
QVAPWTSVGMRPQPSLEVISQLKPDLIIADVQRHSSAYDALSKIAPTLLLKSRGENYEQNLDAAMKIGIVLNKEQEMKSR
IEQHKTVMAKFKTKFASSDTMQFAVATEKGMWLHGPKSYAGSVLTCLGIQSPIPNETERAYVEVSLEQLLKTNPDWLLIG
PYSENTIADTWKQSPLFNLLNARKRQQVVNVSPQAWSLNRGMHAAEQIAQDLSELLNK
>Mature_297_residues
GLIHRAIALVMCTLTSFGSFANNERSVTDERGTFTITGTPQRVVALEYSFVDALASVGVSPVGVADDKDVNRILKSIRDQ
VAPWTSVGMRPQPSLEVISQLKPDLIIADVQRHSSAYDALSKIAPTLLLKSRGENYEQNLDAAMKIGIVLNKEQEMKSRI
EQHKTVMAKFKTKFASSDTMQFAVATEKGMWLHGPKSYAGSVLTCLGIQSPIPNETERAYVEVSLEQLLKTNPDWLLIGP
YSENTIADTWKQSPLFNLLNARKRQQVVNVSPQAWSLNRGMHAAEQIAQDLSELLNK

Specific function: Binds citrate-dependent Fe(3+); part of the binding- protein-dependent transport system for uptake of citrate-dependent Fe(3+) [H]

COG id: COG4594

COG function: function code P; ABC-type Fe3+-citrate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=271, Percent_Identity=46.8634686346863, Blast_Score=258, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 33000; Mature: 32869

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIHRAIALVMCTLTSFGSFANNERSVTDERGTFTITGTPQRVVALEYSFVDALASVGV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCCC
SPVGVADDKDVNRILKSIRDQVAPWTSVGMRPQPSLEVISQLKPDLIIADVQRHSSAYDA
CCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHH
LSKIAPTLLLKSRGENYEQNLDAAMKIGIVLNKEQEMKSRIEQHKTVMAKFKTKFASSDT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
MQFAVATEKGMWLHGPKSYAGSVLTCLGIQSPIPNETERAYVEVSLEQLLKTNPDWLLIG
EEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC
PYSENTIADTWKQSPLFNLLNARKRQQVVNVSPQAWSLNRGMHAAEQIAQDLSELLNK
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLIHRAIALVMCTLTSFGSFANNERSVTDERGTFTITGTPQRVVALEYSFVDALASVGV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCCC
SPVGVADDKDVNRILKSIRDQVAPWTSVGMRPQPSLEVISQLKPDLIIADVQRHSSAYDA
CCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHH
LSKIAPTLLLKSRGENYEQNLDAAMKIGIVLNKEQEMKSRIEQHKTVMAKFKTKFASSDT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
MQFAVATEKGMWLHGPKSYAGSVLTCLGIQSPIPNETERAYVEVSLEQLLKTNPDWLLIG
EEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC
PYSENTIADTWKQSPLFNLLNARKRQQVVNVSPQAWSLNRGMHAAEQIAQDLSELLNK
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2651410; 7610040; 9278503 [H]