| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977219
Identifier: 156977219
GI number: 156977219
Start: 1192241
End: 1192717
Strand: Direct
Name: 156977219
Synonym: VIBHAR_06005
Alternate gene names: NA
Gene position: 1192241-1192717 (Clockwise)
Preceding gene: 156977218
Following gene: 156977221
Centisome position: 54.09
GC content: 47.17
Gene sequence:
>477_bases ATGAAATATATAATTGCAATTCTTATTGGGGTTATCCTACTCGCGCTCGCCGCCTGTGGGGGCGGTGATGGCTCTGGCGG TGGAAGCAGCGATGATGACAGCTCTACTCCGCCTCCTGTTACCATTGTTGAACCAGATGAACCAGATGATCCGACAACAG CGCAGGACTTAGTTGTCCCAGAGGGCTTTGACTACAACCCAGTGAAACCAGGCACACTGAGTGTGGATATTAGCGGCTTT TCGACACAACGAGCACAGTTGAGTTTGTACAAGCAATTTAGCGAAGACAACGCTGGTAACTACCGAGCTCATTACCCAAG TAAAGCGGTTTCTGTCCCATTGACCAGTGGGAAAGTGGATTTCGACTTTAATGTATCTGACATCCAAAAAGACTTGCTGG TCGAGATTTGGTTTTATGATGGCTCAGAGCCGATAAAACGTGTTATCTCTGTCAATGACACTAGCTTGAAGCTCTAA
Upstream 100 bases:
>100_bases GTTCCAAGATTGGGCAGAATCTGGCGGCACAACAAACCAAAACTGGCATCAATCACCTGCCACTGACAAAACTTACGATC TGCCATAGGGAGAGGATACG
Downstream 100 bases:
>100_bases AGCTTTCTAGCTCTACGGGCAACTAAGCTCCACATAAAAATCGCATGCTTCTTCGGAACATGCGGTTTTTTGAATTGGGA GAAAACGTCATAAATTAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKYIIAILIGVILLALAACGGGDGSGGGSSDDDSSTPPPVTIVEPDEPDDPTTAQDLVVPEGFDYNPVKPGTLSVDISGF STQRAQLSLYKQFSEDNAGNYRAHYPSKAVSVPLTSGKVDFDFNVSDIQKDLLVEIWFYDGSEPIKRVISVNDTSLKL
Sequences:
>Translated_158_residues MKYIIAILIGVILLALAACGGGDGSGGGSSDDDSSTPPPVTIVEPDEPDDPTTAQDLVVPEGFDYNPVKPGTLSVDISGF STQRAQLSLYKQFSEDNAGNYRAHYPSKAVSVPLTSGKVDFDFNVSDIQKDLLVEIWFYDGSEPIKRVISVNDTSLKL >Mature_158_residues MKYIIAILIGVILLALAACGGGDGSGGGSSDDDSSTPPPVTIVEPDEPDDPTTAQDLVVPEGFDYNPVKPGTLSVDISGF STQRAQLSLYKQFSEDNAGNYRAHYPSKAVSVPLTSGKVDFDFNVSDIQKDLLVEIWFYDGSEPIKRVISVNDTSLKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16871; Mature: 16871
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIIAILIGVILLALAACGGGDGSGGGSSDDDSSTPPPVTIVEPDEPDDPTTAQDLVVP CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECC EGFDYNPVKPGTLSVDISGFSTQRAQLSLYKQFSEDNAGNYRAHYPSKAVSVPLTSGKVD CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEE FDFNVSDIQKDLLVEIWFYDGSEPIKRVISVNDTSLKL EECCHHHHHHCEEEEEEEECCCHHHHHHHCCCCCEECC >Mature Secondary Structure MKYIIAILIGVILLALAACGGGDGSGGGSSDDDSSTPPPVTIVEPDEPDDPTTAQDLVVP CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECC EGFDYNPVKPGTLSVDISGFSTQRAQLSLYKQFSEDNAGNYRAHYPSKAVSVPLTSGKVD CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEE FDFNVSDIQKDLLVEIWFYDGSEPIKRVISVNDTSLKL EECCHHHHHHCEEEEEEEECCCHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA