Click here to switch to the map view.

The map label for this gene is 156977175

Identifier: 156977175

GI number: 156977175

Start: 1149130

End: 1149843

Strand: Reverse

Name: 156977175

Synonym: VIBHAR_05961

Alternate gene names: NA

Gene position: 1149843-1149130 (Counterclockwise)

Preceding gene: 156977176

Following gene: 156977171

Centisome position: 52.17

GC content: 46.64

Gene sequence:

>714_bases
ATGAACAATCGCGGATTACACGGACTCTTCCTTTTAGGCTCACTAGCGCTAATTGGCTGTTCTTCAACAGACGGCATCTC
TACCGATAACTCAGACTCTCAAGCGCCAGTAGAATTAAAAAGCGCGGATGCAGCCACAATTGCAACTTGGATCGACCAAA
GCGTTCTGATGCCACAGGGTCTTTCTTTAGAAACAGATAAAATTCGTTATGTTACTGGATCAGCGGATTTGAATAGTGAC
GGCACAGCAGAGCATTTGGTGCTATTCCAAGACCGTTTCTTCTGCGGAAGTGGTGGTTGCACGGCGTATATGTTCGATAA
CAACGGCAAAGTGCTGAACCGCATGTCGGTAACGAGAACACCAATTGCTCTCATTGACAGCTACAGTAACGGTTGGCAAG
ACTTTGTAGTGTGGAGTAATGGTGCTTACCGTCAGATGAGTTACAACGGTGAATCTTACCCAACGAACCCTTCACTAGAA
CCTAAAGTTGATCGCAATACGCAGGTACAAACCGCCACGGCGTATGTTATGGCGACCGAGTTATACCAACGAGATGGTTA
CGATATTATGCCAGCCGATGATGAGCAGATTTGGACCCCGGCGAACGTGTACCACTTCACCTTTAAACACCATGGTGACC
CACATAATGTTTACAATGCGACGGTGAACTTGAGCAGCGGTGATGTGGATGTTGAATCAGTACCAATGCAATAA

Upstream 100 bases:

>100_bases
GGTTTCGTGTACACCTAACCGATTTTTATGATTTTCTTACAAGCGATTGATAAATCTTGCGTATACTAAGTGCACATCAA
CAATAAAAGAGCGAACGCAA

Downstream 100 bases:

>100_bases
ATTGTCGGTTTAAACACTGCCAACTTAAACAAGAAAGGGCGAACACTTATTATAAGCGTTCGCCCTTTGTTTTAGGGGAT
CTTGTACCCGGTATGGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNNRGLHGLFLLGSLALIGCSSTDGISTDNSDSQAPVELKSADAATIATWIDQSVLMPQGLSLETDKIRYVTGSADLNSD
GTAEHLVLFQDRFFCGSGGCTAYMFDNNGKVLNRMSVTRTPIALIDSYSNGWQDFVVWSNGAYRQMSYNGESYPTNPSLE
PKVDRNTQVQTATAYVMATELYQRDGYDIMPADDEQIWTPANVYHFTFKHHGDPHNVYNATVNLSSGDVDVESVPMQ

Sequences:

>Translated_237_residues
MNNRGLHGLFLLGSLALIGCSSTDGISTDNSDSQAPVELKSADAATIATWIDQSVLMPQGLSLETDKIRYVTGSADLNSD
GTAEHLVLFQDRFFCGSGGCTAYMFDNNGKVLNRMSVTRTPIALIDSYSNGWQDFVVWSNGAYRQMSYNGESYPTNPSLE
PKVDRNTQVQTATAYVMATELYQRDGYDIMPADDEQIWTPANVYHFTFKHHGDPHNVYNATVNLSSGDVDVESVPMQ
>Mature_237_residues
MNNRGLHGLFLLGSLALIGCSSTDGISTDNSDSQAPVELKSADAATIATWIDQSVLMPQGLSLETDKIRYVTGSADLNSD
GTAEHLVLFQDRFFCGSGGCTAYMFDNNGKVLNRMSVTRTPIALIDSYSNGWQDFVVWSNGAYRQMSYNGESYPTNPSLE
PKVDRNTQVQTATAYVMATELYQRDGYDIMPADDEQIWTPANVYHFTFKHHGDPHNVYNATVNLSSGDVDVESVPMQ

Specific function: Unknown

COG id: COG3650

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26060; Mature: 26060

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRGLHGLFLLGSLALIGCSSTDGISTDNSDSQAPVELKSADAATIATWIDQSVLMPQG
CCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCHHCCCCC
LSLETDKIRYVTGSADLNSDGTAEHLVLFQDRFFCGSGGCTAYMFDNNGKVLNRMSVTRT
CCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCC
PIALIDSYSNGWQDFVVWSNGAYRQMSYNGESYPTNPSLEPKVDRNTQVQTATAYVMATE
CEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHEEEEEHH
LYQRDGYDIMPADDEQIWTPANVYHFTFKHHGDPHNVYNATVNLSSGDVDVESVPMQ
HHHCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEEECCCC
>Mature Secondary Structure
MNNRGLHGLFLLGSLALIGCSSTDGISTDNSDSQAPVELKSADAATIATWIDQSVLMPQG
CCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCHHCCCCC
LSLETDKIRYVTGSADLNSDGTAEHLVLFQDRFFCGSGGCTAYMFDNNGKVLNRMSVTRT
CCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCC
PIALIDSYSNGWQDFVVWSNGAYRQMSYNGESYPTNPSLEPKVDRNTQVQTATAYVMATE
CEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHEEEEEHH
LYQRDGYDIMPADDEQIWTPANVYHFTFKHHGDPHNVYNATVNLSSGDVDVESVPMQ
HHHCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA