| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977169
Identifier: 156977169
GI number: 156977169
Start: 1142017
End: 1142556
Strand: Reverse
Name: 156977169
Synonym: VIBHAR_05955
Alternate gene names: NA
Gene position: 1142556-1142017 (Counterclockwise)
Preceding gene: 156977171
Following gene: 156977162
Centisome position: 51.84
GC content: 46.48
Gene sequence:
>540_bases ATGACCCAAGATTACGAACACGAAGAGTATTTAGAAGGCGAAGAGATTGAGATCGAAGCGATCGGTATCGACGTTGACGC GCACCCAATTGAGCTGTACAAGCTTTTCAAAATCGCAAACTTGGTGAGTGGCGGTGGTGAAGCAAAACACATCATCGAAG AAGGTTACGTAGCGGTAAATGGTGAGCTAGAAACGCGTAAACGTCGCAAAATGTACGACGGTGATTTCTTTGAGTTCAAC CAAGAATACTATGTTGTTGTGTGTGATGCGCCAGTGACTGAGCCAGAAACTGCAGAGCAAAAAGCAGAGAAGAAGGCGAA GAAAGAAGCGCAAACGGCTCGTAAAGAAAAGTCTCGCTCGAAAAAGAACGAGAAAGCGAACGTTAAGGGCCCTAAGTCGA CTGGTCGTAAAGCTGCACACAAAGAGCGTAAAGCACAGAAAGAAGCGTTGTCTCAATCTGCTAAGAAAGGCAAGAAAGAC GACAAGCCTCAAGCGGTTCGCGATCCTAAGAGTGGCCGCAACTCAATCGACTTCTTCTAA
Upstream 100 bases:
>100_bases GGTGAGTATATACCCAATTGGACAAGTTGAGTGAAGATCACGTTTCTATTTGTACGCATTCCGTTTAAACTCCGTTCATC AAGAAAAATGAGTAACGAAC
Downstream 100 bases:
>100_bases ACGCCTCATTTCGATATCAGAATCGACATAAACAGAAAAGCGCCGCCTTGGTGAGTAACCTAGGCGGCGCTTTTGTATCT AAAAAAATTTAGTTCGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTQDYEHEEYLEGEEIEIEAIGIDVDAHPIELYKLFKIANLVSGGGEAKHIIEEGYVAVNGELETRKRRKMYDGDFFEFN QEYYVVVCDAPVTEPETAEQKAEKKAKKEAQTARKEKSRSKKNEKANVKGPKSTGRKAAHKERKAQKEALSQSAKKGKKD DKPQAVRDPKSGRNSIDFF
Sequences:
>Translated_179_residues MTQDYEHEEYLEGEEIEIEAIGIDVDAHPIELYKLFKIANLVSGGGEAKHIIEEGYVAVNGELETRKRRKMYDGDFFEFN QEYYVVVCDAPVTEPETAEQKAEKKAKKEAQTARKEKSRSKKNEKANVKGPKSTGRKAAHKERKAQKEALSQSAKKGKKD DKPQAVRDPKSGRNSIDFF >Mature_178_residues TQDYEHEEYLEGEEIEIEAIGIDVDAHPIELYKLFKIANLVSGGGEAKHIIEEGYVAVNGELETRKRRKMYDGDFFEFNQ EYYVVVCDAPVTEPETAEQKAEKKAKKEAQTARKEKSRSKKNEKANVKGPKSTGRKAAHKERKAQKEALSQSAKKGKKDD KPQAVRDPKSGRNSIDFF
Specific function: Unknown
COG id: COG2501
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20323; Mature: 20192
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDYEHEEYLEGEEIEIEAIGIDVDAHPIELYKLFKIANLVSGGGEAKHIIEEGYVAVN CCCCCCCHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEC GELETRKRRKMYDGDFFEFNQEYYVVVCDAPVTEPETAEQKAEKKAKKEAQTARKEKSRS CCHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KKNEKANVKGPKSTGRKAAHKERKAQKEALSQSAKKGKKDDKPQAVRDPKSGRNSIDFF HCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure TQDYEHEEYLEGEEIEIEAIGIDVDAHPIELYKLFKIANLVSGGGEAKHIIEEGYVAVN CCCCCCHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEC GELETRKRRKMYDGDFFEFNQEYYVVVCDAPVTEPETAEQKAEKKAKKEAQTARKEKSRS CCHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KKNEKANVKGPKSTGRKAAHKERKAQKEALSQSAKKGKKDDKPQAVRDPKSGRNSIDFF HCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA