| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is gltK [H]
Identifier: 156977167
GI number: 156977167
Start: 1140072
End: 1140992
Strand: Direct
Name: gltK [H]
Synonym: VIBHAR_05953
Alternate gene names: 156977167
Gene position: 1140072-1140992 (Clockwise)
Preceding gene: 156977166
Following gene: 156977168
Centisome position: 51.73
GC content: 45.06
Gene sequence:
>921_bases TTGAGCGGACAAACCACCACTCGCGTTGCACCAACCAAAAACAATACAGGTCTTTTCTTAAGTCGTTTTAACCTACTTGA TTGGGTGCTACTGGCCATCTGTGGATTGGCTGGGGTTTGGCTTTATCATCGCTCTACCGTTGGCGTAAATTACATATGGC ATTGGAAAGAAGCCATTGACCTGTTGTTCACACCGCGAACAAACGGTGGCTTACCGTATTTCTTTCAAGGCTTAGCTTCA ACACTTCGCCTTAGCATCTGGGGCATCGTATTCGCGTTGGTACTAGGAACCTTTCTTGGATTAGCTCGCTTTTCTGATTC AGTATGGCTGCGCACACCTGCCAATGCGTTTATTCAATTGGTACGAAACATTCCTCCTTTAGTGTTCGTCTTCATCTTTT ACTTCTTCATCTCTAACCAGTTAATCCCACTACTGGGGCTAGAAGACATTTTACGTAACTACCGTGGCGAACCTAACGCA GTTCAAAGCTTCTTCTTTGGGCCCGCTAACCTTTGGGAAAACTTAGCCTCTGGTGTCCTTTGTGTTGGTCTACTTTCTTC GGCTTACATCGCAGAAGTCGTGCGTGCTGGATTGCAAAGCGTCGACAAAGGCCAATGGGAAGCCGCAGATTCGCTCGGAT TATCATCTTGGGTTAAATACCGCTTTGTCATTGCGCCGCAAGTATTGAAAGCCATTACACCAGCACTAGCAGGTCAGACC ATCTCTCTGGTTAAAGACACCTCCATCGTATCTCTCATCTCGATTCAAGAAATGACCTTCGTCGGCACCGAGATGGCGAA CTCATCTGGCTACATTTTCGAAATTTGGCTGATTGTCGGCTTCGTTTACTTCCTTATTTGTTTCGGTCTATCAATGTTTT TCAGATATATCGAGAAAAAATCGGAATCTAATTCAAATTAA
Upstream 100 bases:
>100_bases GAATAATGAGCACTTTCACAGCCATTGCAACTTTTACAATAAATACAATAACCGACTCGTTTAACGGGTCGGTATTTATC TTTACTACCGGAGTCAAACC
Downstream 100 bases:
>100_bases CTCAATAGGCTTCAAAATAAGCCATCGTAGTGCTTCAAATCAGAATTCCATCCTGTTACAGTCCTCCGTATGCTACTATC TTGGCGTTTTTCATGGAGTT
Product: ABC transporter permease protein
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSGQTTTRVAPTKNNTGLFLSRFNLLDWVLLAICGLAGVWLYHRSTVGVNYIWHWKEAIDLLFTPRTNGGLPYFFQGLAS TLRLSIWGIVFALVLGTFLGLARFSDSVWLRTPANAFIQLVRNIPPLVFVFIFYFFISNQLIPLLGLEDILRNYRGEPNA VQSFFFGPANLWENLASGVLCVGLLSSAYIAEVVRAGLQSVDKGQWEAADSLGLSSWVKYRFVIAPQVLKAITPALAGQT ISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIWLIVGFVYFLICFGLSMFFRYIEKKSESNSN
Sequences:
>Translated_306_residues MSGQTTTRVAPTKNNTGLFLSRFNLLDWVLLAICGLAGVWLYHRSTVGVNYIWHWKEAIDLLFTPRTNGGLPYFFQGLAS TLRLSIWGIVFALVLGTFLGLARFSDSVWLRTPANAFIQLVRNIPPLVFVFIFYFFISNQLIPLLGLEDILRNYRGEPNA VQSFFFGPANLWENLASGVLCVGLLSSAYIAEVVRAGLQSVDKGQWEAADSLGLSSWVKYRFVIAPQVLKAITPALAGQT ISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIWLIVGFVYFLICFGLSMFFRYIEKKSESNSN >Mature_305_residues SGQTTTRVAPTKNNTGLFLSRFNLLDWVLLAICGLAGVWLYHRSTVGVNYIWHWKEAIDLLFTPRTNGGLPYFFQGLAST LRLSIWGIVFALVLGTFLGLARFSDSVWLRTPANAFIQLVRNIPPLVFVFIFYFFISNQLIPLLGLEDILRNYRGEPNAV QSFFFGPANLWENLASGVLCVGLLSSAYIAEVVRAGLQSVDKGQWEAADSLGLSSWVKYRFVIAPQVLKAITPALAGQTI SLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIWLIVGFVYFLICFGLSMFFRYIEKKSESNSN
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=232, Percent_Identity=29.3103448275862, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1788226, Length=245, Percent_Identity=29.3877551020408, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI87082239, Length=232, Percent_Identity=33.6206896551724, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786874, Length=236, Percent_Identity=27.9661016949153, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787030, Length=233, Percent_Identity=30.0429184549356, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI48994930, Length=138, Percent_Identity=36.9565217391304, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1787087, Length=230, Percent_Identity=26.9565217391304, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1788645, Length=228, Percent_Identity=25.8771929824561, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788646, Length=195, Percent_Identity=23.5897435897436, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34178; Mature: 34047
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGQTTTRVAPTKNNTGLFLSRFNLLDWVLLAICGLAGVWLYHRSTVGVNYIWHWKEAID CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHH LLFTPRTNGGLPYFFQGLASTLRLSIWGIVFALVLGTFLGLARFSDSVWLRTPANAFIQL HEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHH VRNIPPLVFVFIFYFFISNQLIPLLGLEDILRNYRGEPNAVQSFFFGPANLWENLASGVL HHCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHH CVGLLSSAYIAEVVRAGLQSVDKGQWEAADSLGLSSWVKYRFVIAPQVLKAITPALAGQT HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH ISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIWLIVGFVYFLICFGLSMFFRYIEKK HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SESNSN CCCCCC >Mature Secondary Structure SGQTTTRVAPTKNNTGLFLSRFNLLDWVLLAICGLAGVWLYHRSTVGVNYIWHWKEAID CCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHH LLFTPRTNGGLPYFFQGLASTLRLSIWGIVFALVLGTFLGLARFSDSVWLRTPANAFIQL HEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHH VRNIPPLVFVFIFYFFISNQLIPLLGLEDILRNYRGEPNAVQSFFFGPANLWENLASGVL HHCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHH CVGLLSSAYIAEVVRAGLQSVDKGQWEAADSLGLSSWVKYRFVIAPQVLKAITPALAGQT HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH ISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIWLIVGFVYFLICFGLSMFFRYIEKK HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SESNSN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]