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The map label for this gene is fliY [H]

Identifier: 156977166

GI number: 156977166

Start: 1139101

End: 1139919

Strand: Direct

Name: fliY [H]

Synonym: VIBHAR_05952

Alternate gene names: 156977166

Gene position: 1139101-1139919 (Clockwise)

Preceding gene: 156977165

Following gene: 156977167

Centisome position: 51.68

GC content: 49.57

Gene sequence:

>819_bases
ATGAAGTTATTCAAAGCGACCATTACTGCATTATTGGGGCTTGCGATTGCTTTACCTTCATTAGCCAATGAAGAAGCCGC
AACGTCGAACGTAGAGCAAATCAAAGAGCGTGGCACGCTGCGCGTTGGTATGTCGACATTCGTGCCTTGGGCAATGCGTA
ACAAACAAGGTGAACTGATTGGTTTTGAAATCGACGTGGCAAAACGCTTAGCCGCAGATTCAGGCCTCAAAGTCGAGTTT
GTCCCAACCGCATGGGACGGTATCATCCCTGCTCTGTTGGCTAAAAAGTTTGACGTGATCATCGGTGGTATGTCGATAAC
TCCAGAGCGTTCAAAGAGCGTGCTTTTCACTGAGCCTTATTCGCACTCTGGCGTACAAGTAGCCGCCAACAAAGAACTAG
CAGAAGGTTTTAGCGAGTTCTCAGATTTTAACTCTCGCCGTGTGAAGATTGCCGCTCGTCGTGGCGCGTTCACTGTGCAA
GTAGCGCGTGAGACTTTCCCTAAAGCGAAGATCCTTCAGTTCGATGACGACGCTCAAGCATTCCAAGAAGTACTAAACGG
CAATGCCCACGCAGTGATCGCATCAAGCCCGAGACCAGAGCACGAAGCGATCGAGCACGCAGACAAATTGTTCATTCCGT
TTTCAGAGCGTCTGTCAAAAGGCAACGAAGCCTTCGCCGTGCGCCTAGGTGAGGAGGACAAAAAGGCCTTCTTCAACCAA
TGGATTGAAGCTCGTACACAAGACGGTTGGCTAGATGAACGTTACGAGTACTGGTTCTCGACGTTAGATTGGCAAGACCA
AGTTGCACAAGGCCAATAG

Upstream 100 bases:

>100_bases
GGCAGCAATCTACCTTGCTCTCACATTATCACTTTCTGGCTTATCCGCTTGGCTGGAACACAAACTAGGAGCCAGTTGGC
GCAAATTATAAGGAGATAAC

Downstream 100 bases:

>100_bases
CCCTCGCAGTTACTCATAAAGTCATAAGCTGTCGCGGTTGCTCATAGCATTAGAATAATGAGCACTTTCACAGCCATTGC
AACTTTTACAATAAATACAA

Product: ABC amino acid transporter periplasmic ligand binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKLFKATITALLGLAIALPSLANEEAATSNVEQIKERGTLRVGMSTFVPWAMRNKQGELIGFEIDVAKRLAADSGLKVEF
VPTAWDGIIPALLAKKFDVIIGGMSITPERSKSVLFTEPYSHSGVQVAANKELAEGFSEFSDFNSRRVKIAARRGAFTVQ
VARETFPKAKILQFDDDAQAFQEVLNGNAHAVIASSPRPEHEAIEHADKLFIPFSERLSKGNEAFAVRLGEEDKKAFFNQ
WIEARTQDGWLDERYEYWFSTLDWQDQVAQGQ

Sequences:

>Translated_272_residues
MKLFKATITALLGLAIALPSLANEEAATSNVEQIKERGTLRVGMSTFVPWAMRNKQGELIGFEIDVAKRLAADSGLKVEF
VPTAWDGIIPALLAKKFDVIIGGMSITPERSKSVLFTEPYSHSGVQVAANKELAEGFSEFSDFNSRRVKIAARRGAFTVQ
VARETFPKAKILQFDDDAQAFQEVLNGNAHAVIASSPRPEHEAIEHADKLFIPFSERLSKGNEAFAVRLGEEDKKAFFNQ
WIEARTQDGWLDERYEYWFSTLDWQDQVAQGQ
>Mature_272_residues
MKLFKATITALLGLAIALPSLANEEAATSNVEQIKERGTLRVGMSTFVPWAMRNKQGELIGFEIDVAKRLAADSGLKVEF
VPTAWDGIIPALLAKKFDVIIGGMSITPERSKSVLFTEPYSHSGVQVAANKELAEGFSEFSDFNSRRVKIAARRGAFTVQ
VARETFPKAKILQFDDDAQAFQEVLNGNAHAVIASSPRPEHEAIEHADKLFIPFSERLSKGNEAFAVRLGEEDKKAFFNQ
WIEARTQDGWLDERYEYWFSTLDWQDQVAQGQ

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=268, Percent_Identity=29.4776119402985, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1787085, Length=152, Percent_Identity=32.2368421052632, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787031, Length=220, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788648, Length=98, Percent_Identity=37.7551020408163, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787088, Length=225, Percent_Identity=22.6666666666667, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788649, Length=104, Percent_Identity=31.7307692307692, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 30343; Mature: 30343

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFKATITALLGLAIALPSLANEEAATSNVEQIKERGTLRVGMSTFVPWAMRNKQGELI
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECHHHHCCHHHCCCCCCEE
GFEIDVAKRLAADSGLKVEFVPTAWDGIIPALLAKKFDVIIGGMSITPERSKSVLFTEPY
EEEHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCCEECCCCCCCEEEECCC
SHSGVQVAANKELAEGFSEFSDFNSRRVKIAARRGAFTVQVARETFPKAKILQFDDDAQA
CCCCEEEEECHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHCCCCEEEEECCHHHH
FQEVLNGNAHAVIASSPRPEHEAIEHADKLFIPFSERLSKGNEAFAVRLGEEDKKAFFNQ
HHHHHCCCCEEEEECCCCCHHHHHHHHHHEECCHHHHHCCCCCEEEEEECCHHHHHHHHH
WIEARTQDGWLDERYEYWFSTLDWQDQVAQGQ
HHHHCCCCCCHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MKLFKATITALLGLAIALPSLANEEAATSNVEQIKERGTLRVGMSTFVPWAMRNKQGELI
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECHHHHCCHHHCCCCCCEE
GFEIDVAKRLAADSGLKVEFVPTAWDGIIPALLAKKFDVIIGGMSITPERSKSVLFTEPY
EEEHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCCEECCCCCCCEEEECCC
SHSGVQVAANKELAEGFSEFSDFNSRRVKIAARRGAFTVQVARETFPKAKILQFDDDAQA
CCCCEEEEECHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHCCCCEEEEECCHHHH
FQEVLNGNAHAVIASSPRPEHEAIEHADKLFIPFSERLSKGNEAFAVRLGEEDKKAFFNQ
HHHHHCCCCEEEEECCCCCHHHHHHHHHHEECCHHHHHCCCCCEEEEEECCHHHHHHHHH
WIEARTQDGWLDERYEYWFSTLDWQDQVAQGQ
HHHHCCCCCCHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]