| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156977106
Identifier: 156977106
GI number: 156977106
Start: 1084637
End: 1085359
Strand: Reverse
Name: 156977106
Synonym: VIBHAR_05892
Alternate gene names: NA
Gene position: 1085359-1084637 (Counterclockwise)
Preceding gene: 156977109
Following gene: 156977104
Centisome position: 49.24
GC content: 46.89
Gene sequence:
>723_bases ATGAGCCAATCTTCTTTCGAATCTATTGTCCATTTACGTCGTTCAGTTAGAAAATACGATGCGGATGCTGAATTTAACCA CGACGATGTAGCAACGGCCCTAGAGTTGACGACTTTAAGCCCCAATAGCAGCAACATGCAGATGTGGGAATTTCATCGAG TTATCTCGGATGAGAAAAAAGCAAAGCTAGCAGAATACTGTATGGGACAAAATGCAGCCAAAACCGCGAATGAACTGGTG GTTTTTGTCGCAACGACCCACAACTGGGAAGAGCGCGCCAAGCGCAACGCAGAGACTGTGCGTCAAGCTTTTAAAGGCCG TGACGACGTTGCGGCCAAGCGCGCTCTAAAGTATTACGAAAAACTCATCCCAATGGTTTACAACAACGACATGTTTGGTG TCCGCGGTTTGCTGAGGAAGGCATATAGCTGGTGGTTAGGTAGAAACAAACCCATGGTGCGAGAAGTGAGTAAATCGGAC GTACGTGTTTGTTTGCACAAGAGCGTTTCACTTGCTGCGATGACCTTTATGTACGCAATGCGCGAGAAAGGTTATGACAC GTGCCCGATGGAGGGATTTGATTCAAAACGCGTAAAGCAGCTACTCGGTTTAAGAGACAGTGACCAGATCACAATGGTTG TTAGCTGTGGTGTTAGAACTGATGAGGGCGTATACGGAGAACGTCATCGTGTCGCGAATGAGTCAGTGATTAAAACGCAC TAA
Upstream 100 bases:
>100_bases ACAAACAGTCTGACGTGAATTTAAGTTTGGCGTTGTATTTGCACTTGCAGCTTATCGATGAATCAGTAAAGATCACTTTT TTCCATATTTTGAGTTTGTT
Downstream 100 bases:
>100_bases TTTATCGCTAAACTTTTTTTTCGAGCTGCCGCTAATAACTAGAACGCCTTTCCATATTGAACGTATGGCTGTGTTTTGTT CAAAAATGAGACGAAATTTC
Product: NAD(P)H-flavin oxidoreductase
Products: NA
Alternate protein names: NAD(P)H-Flavin Oxidoreductase; Nitroreductase Family Protein; NADPH Nitroreductase Protein; Nitrorecductase; NAD(P)H Nitroreductase YdfN; NAD(P)H Nitroreductase; NADph Nitroreductase Protein
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSQSSFESIVHLRRSVRKYDADAEFNHDDVATALELTTLSPNSSNMQMWEFHRVISDEKKAKLAEYCMGQNAAKTANELV VFVATTHNWEERAKRNAETVRQAFKGRDDVAAKRALKYYEKLIPMVYNNDMFGVRGLLRKAYSWWLGRNKPMVREVSKSD VRVCLHKSVSLAAMTFMYAMREKGYDTCPMEGFDSKRVKQLLGLRDSDQITMVVSCGVRTDEGVYGERHRVANESVIKTH
Sequences:
>Translated_240_residues MSQSSFESIVHLRRSVRKYDADAEFNHDDVATALELTTLSPNSSNMQMWEFHRVISDEKKAKLAEYCMGQNAAKTANELV VFVATTHNWEERAKRNAETVRQAFKGRDDVAAKRALKYYEKLIPMVYNNDMFGVRGLLRKAYSWWLGRNKPMVREVSKSD VRVCLHKSVSLAAMTFMYAMREKGYDTCPMEGFDSKRVKQLLGLRDSDQITMVVSCGVRTDEGVYGERHRVANESVIKTH >Mature_239_residues SQSSFESIVHLRRSVRKYDADAEFNHDDVATALELTTLSPNSSNMQMWEFHRVISDEKKAKLAEYCMGQNAAKTANELVV FVATTHNWEERAKRNAETVRQAFKGRDDVAAKRALKYYEKLIPMVYNNDMFGVRGLLRKAYSWWLGRNKPMVREVSKSDV RVCLHKSVSLAAMTFMYAMREKGYDTCPMEGFDSKRVKQLLGLRDSDQITMVVSCGVRTDEGVYGERHRVANESVIKTH
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27563; Mature: 27432
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSSFESIVHLRRSVRKYDADAEFNHDDVATALELTTLSPNSSNMQMWEFHRVISDEKK CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHH AKLAEYCMGQNAAKTANELVVFVATTHNWEERAKRNAETVRQAFKGRDDVAAKRALKYYE HHHHHHHHCCCHHCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH KLIPMVYNNDMFGVRGLLRKAYSWWLGRNKPMVREVSKSDVRVCLHKSVSLAAMTFMYAM HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKGYDTCPMEGFDSKRVKQLLGLRDSDQITMVVSCGVRTDEGVYGERHRVANESVIKTH HHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCHHCCC >Mature Secondary Structure SQSSFESIVHLRRSVRKYDADAEFNHDDVATALELTTLSPNSSNMQMWEFHRVISDEKK CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHH AKLAEYCMGQNAAKTANELVVFVATTHNWEERAKRNAETVRQAFKGRDDVAAKRALKYYE HHHHHHHHCCCHHCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH KLIPMVYNNDMFGVRGLLRKAYSWWLGRNKPMVREVSKSDVRVCLHKSVSLAAMTFMYAM HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKGYDTCPMEGFDSKRVKQLLGLRDSDQITMVVSCGVRTDEGVYGERHRVANESVIKTH HHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA