| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is cheV [H]
Identifier: 156977104
GI number: 156977104
Start: 1083396
End: 1084376
Strand: Reverse
Name: cheV [H]
Synonym: VIBHAR_05890
Alternate gene names: 156977104
Gene position: 1084376-1083396 (Counterclockwise)
Preceding gene: 156977106
Following gene: 156977103
Centisome position: 49.2
GC content: 43.12
Gene sequence:
>981_bases ATGAGTAACGTAACCAGTACTATTCTGACTGAAAGTGGTACCAATGAGCTTGAAATCATTGAGTTCCATTTAGAAAAACA ATTGCCAGATGGCAGCACAAAAACATGTTATTACGGTATTAACGTCGCTAAAGTACGAGAAGTGATTCGCGTACCAGAGA CTACTGATTATCCGAATGCACAACCTCATATGATCGGCGTATTCTCGTCGCGCGACGTATTAACACCTCTGGTTGACCTT GCTGGTTGGTTAGGTGTTCCTACTCGCCGTGATCTTGAGCGTAAGTTCGTTATCGTTACCGATTTCAACAAGATGACAAA TGGCTTCTTGATTGACAGTATTTCGCGTATCCACCGTATTTCTTGGAACGATGTGGAATCTCCAAGCCAATTCTTAGAGG CGGGTGAGCAAGATTGTGTTGTGGCTGTTGTTCGTAAAGATGGCAACCTGATCATGATTCTGGATTTCGAGAAAATCATT GCAGACATCAACCCAGAACTGAGTATGGAAAAATACGATGTGACTGGCGATAAATCAGTAGACTTGAACCAACGTATGGT AGGTAAGCGTAACGCAAAAACCATCATGGTGGTGGATGACTCTGCGTTTATTCGTTCATTGATTCAAGATACATTGGCTT CCGCGGGTTATAACGTGATCACCTGTAAAGATGGTGGCGAAGCGTATGAAAAATTGATGAGCTTGGTCGAAGTCGCGAAA GAAGAAAACTTGCCAGTTCGTGAATTGCTTGATGCCGTTGTAACCGACGTAGAAATGCCTCGTATGGATGGTATGCACTT AGTCAAACGACTGCGTGATACGCAAGAATATAACGAAATGCCTATCGTAATGTTTTCTTCATTAATGAGTGAAGATAACC GTGCGAAGGCGTTGTCCCTTGGTGCTAATGACACCATCACCAAGCCAGAGATTGGCCGCATGGTGAATATGATGGACAAG CACGTATTTAATTTCGCATAA
Upstream 100 bases:
>100_bases AAGACTACAAAAGGACTCTTGGAAATTTACGCCTGTGAAGTGATTCTCTGTGGCATTGCATCAAGCCACTTCTTGATGCG TATTTTGGATAATTGGGTTT
Downstream 100 bases:
>100_bases ATTATCTCGAGATAATAAAAAGGCTGCCGAATTGGCAGCCTTTTAGTTATAAAAAGATAGTTTTTCGATTGTGTTTTTAT GCGATCAATAAACTCTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSNVTSTILTESGTNELEIIEFHLEKQLPDGSTKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSRDVLTPLVDL AGWLGVPTRRDLERKFVIVTDFNKMTNGFLIDSISRIHRISWNDVESPSQFLEAGEQDCVVAVVRKDGNLIMILDFEKII ADINPELSMEKYDVTGDKSVDLNQRMVGKRNAKTIMVVDDSAFIRSLIQDTLASAGYNVITCKDGGEAYEKLMSLVEVAK EENLPVRELLDAVVTDVEMPRMDGMHLVKRLRDTQEYNEMPIVMFSSLMSEDNRAKALSLGANDTITKPEIGRMVNMMDK HVFNFA
Sequences:
>Translated_326_residues MSNVTSTILTESGTNELEIIEFHLEKQLPDGSTKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSRDVLTPLVDL AGWLGVPTRRDLERKFVIVTDFNKMTNGFLIDSISRIHRISWNDVESPSQFLEAGEQDCVVAVVRKDGNLIMILDFEKII ADINPELSMEKYDVTGDKSVDLNQRMVGKRNAKTIMVVDDSAFIRSLIQDTLASAGYNVITCKDGGEAYEKLMSLVEVAK EENLPVRELLDAVVTDVEMPRMDGMHLVKRLRDTQEYNEMPIVMFSSLMSEDNRAKALSLGANDTITKPEIGRMVNMMDK HVFNFA >Mature_325_residues SNVTSTILTESGTNELEIIEFHLEKQLPDGSTKTCYYGINVAKVREVIRVPETTDYPNAQPHMIGVFSSRDVLTPLVDLA GWLGVPTRRDLERKFVIVTDFNKMTNGFLIDSISRIHRISWNDVESPSQFLEAGEQDCVVAVVRKDGNLIMILDFEKIIA DINPELSMEKYDVTGDKSVDLNQRMVGKRNAKTIMVVDDSAFIRSLIQDTLASAGYNVITCKDGGEAYEKLMSLVEVAKE ENLPVRELLDAVVTDVEMPRMDGMHLVKRLRDTQEYNEMPIVMFSSLMSEDNRAKALSLGANDTITKPEIGRMVNMMDKH VFNFA
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 36692; Mature: 36560
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVTSTILTESGTNELEIIEFHLEKQLPDGSTKTCYYGINVAKVREVIRVPETTDYPNA CCCCHHHHEECCCCCCEEEEEEEEHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCC QPHMIGVFSSRDVLTPLVDLAGWLGVPTRRDLERKFVIVTDFNKMTNGFLIDSISRIHRI CCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHCCHHHHHHHHHHHC SWNDVESPSQFLEAGEQDCVVAVVRKDGNLIMILDFEKIIADINPELSMEKYDVTGDKSV CCCCCCCHHHHHHCCCCCEEEEEEECCCCEEEEEEHHHHHHCCCCCCCCEEECCCCCCCC DLNQRMVGKRNAKTIMVVDDSAFIRSLIQDTLASAGYNVITCKDGGEAYEKLMSLVEVAK CCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH EENLPVRELLDAVVTDVEMPRMDGMHLVKRLRDTQEYNEMPIVMFSSLMSEDNRAKALSL HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEC GANDTITKPEIGRMVNMMDKHVFNFA CCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNVTSTILTESGTNELEIIEFHLEKQLPDGSTKTCYYGINVAKVREVIRVPETTDYPNA CCCHHHHEECCCCCCEEEEEEEEHHCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCC QPHMIGVFSSRDVLTPLVDLAGWLGVPTRRDLERKFVIVTDFNKMTNGFLIDSISRIHRI CCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHCCHHHHHHHHHHHC SWNDVESPSQFLEAGEQDCVVAVVRKDGNLIMILDFEKIIADINPELSMEKYDVTGDKSV CCCCCCCHHHHHHCCCCCEEEEEEECCCCEEEEEEHHHHHHCCCCCCCCEEECCCCCCCC DLNQRMVGKRNAKTIMVVDDSAFIRSLIQDTLASAGYNVITCKDGGEAYEKLMSLVEVAK CCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH EENLPVRELLDAVVTDVEMPRMDGMHLVKRLRDTQEYNEMPIVMFSSLMSEDNRAKALSL HCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEC GANDTITKPEIGRMVNMMDKHVFNFA CCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]