| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977101
Identifier: 156977101
GI number: 156977101
Start: 1081230
End: 1081337
Strand: Reverse
Name: 156977101
Synonym: VIBHAR_05887
Alternate gene names: NA
Gene position: 1081337-1081230 (Counterclockwise)
Preceding gene: 156977102
Following gene: 156977100
Centisome position: 49.06
GC content: 45.37
Gene sequence:
>108_bases ATGTCGAATCTAGATGAAAAGATCGCTTGGTATAAGAGCATCGGGCTGTTTCTTCAGGTTTTTGGTCTAGCGTTGATTTT AGCGCGAGACCTTGCGCGAAAACCCTAG
Upstream 100 bases:
>100_bases TCAACTGCCTAAGCTGATGTCCGAAATCAATCAAGCTCAAACTAACTATCGAGACCGCATTGACAGTTACTACCTTGAAA ACCTTGAGGTAACTTAAGTC
Downstream 100 bases:
>100_bases GGGTAACACAAATTATTTGCGATTTGCAAAGTGTTGTTTGCAATATGCATCTGCGTGGAAAGTGCAAGGATTAATATTCG TACAATTTTATTGCAAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 35; Mature: 34
Protein sequence:
>35_residues MSNLDEKIAWYKSIGLFLQVFGLALILARDLARKP
Sequences:
>Translated_35_residues MSNLDEKIAWYKSIGLFLQVFGLALILARDLARKP >Mature_34_residues SNLDEKIAWYKSIGLFLQVFGLALILARDLARKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3992; Mature: 3861
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLDEKIAWYKSIGLFLQVFGLALILARDLARKP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNLDEKIAWYKSIGLFLQVFGLALILARDLARKP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA