Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977081

Identifier: 156977081

GI number: 156977081

Start: 1055429

End: 1056373

Strand: Reverse

Name: 156977081

Synonym: VIBHAR_05866

Alternate gene names: NA

Gene position: 1056373-1055429 (Counterclockwise)

Preceding gene: 156977082

Following gene: 156977080

Centisome position: 47.93

GC content: 45.71

Gene sequence:

>945_bases
ATGCATAATTCTACAGGTCGTTACGTGCTGGGGATGGAAGTGATGACGCCCACAGGCATGAACTTGGATATCGCTACCAA
CGTAGCAAATGCTGACTTAGCGAGGTTCGACCAAGTCGTTGGTGAGGACGGAATTGAGCGTTTCACGTTCGCCAAAATTG
AATATACCAAAGAAAGTGATTTGTTCGAAAAAACCTGTGAGTTAACGGCGAACTTATTGGATTCGCTCTTGACCCAGCTG
CCTCGTTCTTTGAAGCCGATTCCATTACTTCTTGCTGTGCCTACGACAATTTCATTAGTGAAGATGCAAGAATGGCTTGG
TGAAAGTGACTATTCTGACTTTCTTTCTGTGGTCGAAACCGTTCACGCAAGCGGTCCTAGCTTCGTGCTACAAGCCATGA
AGTCGTTGGATAAATACGACGCCATGATGTGCATTAGCGTCGATTCTATGGTCAACAGGATGCAAGAACTTATCGACGAT
AACATGGTCATGAGTACTAATAATCCATGGGGAGTGATTCCAAGTGAAGGGGGCTCGGGCCTCATTCTTTGTCGAAGAAA
TACCTTAGAAACACTCAAGCTTAAGCCTTTAGCGCAACTTGGTTATATCGATACCGAACTGAACACGACAGACCGTAGAG
GGATGTACCGCCTTGTACAGCGCGCGAGTAAAAAGCTTAATGCTTTCGGAGAGGTGTATTCTGACATGACGAACCTACGC
GCGCACAGCGAAGATTACGGTTTCGCGCTGGGCGCAAAAGCAGAGCGCTTTACTCATCCCGAACTGCCTATGCTTATCAA
TGAATTATGGGGAACAATGGGCAGTTGCTCTTCACTAGCGCTCTTGGCATTTACAGTTAAAAATCATCATTTTAACCAAC
CTTCATCGCTACTGATGTTTGATTTTAATGGTGACAAAGGGCTACTCCAATTACTCGCTTGCTAG

Upstream 100 bases:

>100_bases
AAAACCATATCAATCAGTTATACGGCTGCATTCCCTTGTCAGGGAAAAGAGCATTTGTTGGTGTCTACGTCTATCACTAA
GTTGGAAGAGGTGAGCGAGC

Downstream 100 bases:

>100_bases
TACGAATCAGAACGTTAATATTAATGAAAACGCTCTCATAATAATGACTTTTTTTTTAATACGAGAAAACAGCATGACTG
ATGTAGTGAAAGCGTAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MHNSTGRYVLGMEVMTPTGMNLDIATNVANADLARFDQVVGEDGIERFTFAKIEYTKESDLFEKTCELTANLLDSLLTQL
PRSLKPIPLLLAVPTTISLVKMQEWLGESDYSDFLSVVETVHASGPSFVLQAMKSLDKYDAMMCISVDSMVNRMQELIDD
NMVMSTNNPWGVIPSEGGSGLILCRRNTLETLKLKPLAQLGYIDTELNTTDRRGMYRLVQRASKKLNAFGEVYSDMTNLR
AHSEDYGFALGAKAERFTHPELPMLINELWGTMGSCSSLALLAFTVKNHHFNQPSSLLMFDFNGDKGLLQLLAC

Sequences:

>Translated_314_residues
MHNSTGRYVLGMEVMTPTGMNLDIATNVANADLARFDQVVGEDGIERFTFAKIEYTKESDLFEKTCELTANLLDSLLTQL
PRSLKPIPLLLAVPTTISLVKMQEWLGESDYSDFLSVVETVHASGPSFVLQAMKSLDKYDAMMCISVDSMVNRMQELIDD
NMVMSTNNPWGVIPSEGGSGLILCRRNTLETLKLKPLAQLGYIDTELNTTDRRGMYRLVQRASKKLNAFGEVYSDMTNLR
AHSEDYGFALGAKAERFTHPELPMLINELWGTMGSCSSLALLAFTVKNHHFNQPSSLLMFDFNGDKGLLQLLAC
>Mature_314_residues
MHNSTGRYVLGMEVMTPTGMNLDIATNVANADLARFDQVVGEDGIERFTFAKIEYTKESDLFEKTCELTANLLDSLLTQL
PRSLKPIPLLLAVPTTISLVKMQEWLGESDYSDFLSVVETVHASGPSFVLQAMKSLDKYDAMMCISVDSMVNRMQELIDD
NMVMSTNNPWGVIPSEGGSGLILCRRNTLETLKLKPLAQLGYIDTELNTTDRRGMYRLVQRASKKLNAFGEVYSDMTNLR
AHSEDYGFALGAKAERFTHPELPMLINELWGTMGSCSSLALLAFTVKNHHFNQPSSLLMFDFNGDKGLLQLLAC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34973; Mature: 34973

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNSTGRYVLGMEVMTPTGMNLDIATNVANADLARFDQVVGEDGIERFTFAKIEYTKESD
CCCCCCCEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHEEEEEEEECCHHH
LFEKTCELTANLLDSLLTQLPRSLKPIPLLLAVPTTISLVKMQEWLGESDYSDFLSVVET
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHH
VHASGPSFVLQAMKSLDKYDAMMCISVDSMVNRMQELIDDNMVMSTNNPWGVIPSEGGSG
HHCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCE
LILCRRNTLETLKLKPLAQLGYIDTELNTTDRRGMYRLVQRASKKLNAFGEVYSDMTNLR
EEEEECCCCCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHSEDYGFALGAKAERFTHPELPMLINELWGTMGSCSSLALLAFTVKNHHFNQPSSLLMF
CCCCCCCEEECCCHHHCCCCCHHHHHHHHHHCCCCHHHHHHHEEEHHCCCCCCCCCEEEE
DFNGDKGLLQLLAC
EECCCHHHHHHHCC
>Mature Secondary Structure
MHNSTGRYVLGMEVMTPTGMNLDIATNVANADLARFDQVVGEDGIERFTFAKIEYTKESD
CCCCCCCEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHEEEEEEEECCHHH
LFEKTCELTANLLDSLLTQLPRSLKPIPLLLAVPTTISLVKMQEWLGESDYSDFLSVVET
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHH
VHASGPSFVLQAMKSLDKYDAMMCISVDSMVNRMQELIDDNMVMSTNNPWGVIPSEGGSG
HHCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCE
LILCRRNTLETLKLKPLAQLGYIDTELNTTDRRGMYRLVQRASKKLNAFGEVYSDMTNLR
EEEEECCCCCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHSEDYGFALGAKAERFTHPELPMLINELWGTMGSCSSLALLAFTVKNHHFNQPSSLLMF
CCCCCCCEEECCCHHHCCCCCHHHHHHHHHHCCCCHHHHHHHEEEHHCCCCCCCCCEEEE
DFNGDKGLLQLLAC
EECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA