| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977081
Identifier: 156977081
GI number: 156977081
Start: 1055429
End: 1056373
Strand: Reverse
Name: 156977081
Synonym: VIBHAR_05866
Alternate gene names: NA
Gene position: 1056373-1055429 (Counterclockwise)
Preceding gene: 156977082
Following gene: 156977080
Centisome position: 47.93
GC content: 45.71
Gene sequence:
>945_bases ATGCATAATTCTACAGGTCGTTACGTGCTGGGGATGGAAGTGATGACGCCCACAGGCATGAACTTGGATATCGCTACCAA CGTAGCAAATGCTGACTTAGCGAGGTTCGACCAAGTCGTTGGTGAGGACGGAATTGAGCGTTTCACGTTCGCCAAAATTG AATATACCAAAGAAAGTGATTTGTTCGAAAAAACCTGTGAGTTAACGGCGAACTTATTGGATTCGCTCTTGACCCAGCTG CCTCGTTCTTTGAAGCCGATTCCATTACTTCTTGCTGTGCCTACGACAATTTCATTAGTGAAGATGCAAGAATGGCTTGG TGAAAGTGACTATTCTGACTTTCTTTCTGTGGTCGAAACCGTTCACGCAAGCGGTCCTAGCTTCGTGCTACAAGCCATGA AGTCGTTGGATAAATACGACGCCATGATGTGCATTAGCGTCGATTCTATGGTCAACAGGATGCAAGAACTTATCGACGAT AACATGGTCATGAGTACTAATAATCCATGGGGAGTGATTCCAAGTGAAGGGGGCTCGGGCCTCATTCTTTGTCGAAGAAA TACCTTAGAAACACTCAAGCTTAAGCCTTTAGCGCAACTTGGTTATATCGATACCGAACTGAACACGACAGACCGTAGAG GGATGTACCGCCTTGTACAGCGCGCGAGTAAAAAGCTTAATGCTTTCGGAGAGGTGTATTCTGACATGACGAACCTACGC GCGCACAGCGAAGATTACGGTTTCGCGCTGGGCGCAAAAGCAGAGCGCTTTACTCATCCCGAACTGCCTATGCTTATCAA TGAATTATGGGGAACAATGGGCAGTTGCTCTTCACTAGCGCTCTTGGCATTTACAGTTAAAAATCATCATTTTAACCAAC CTTCATCGCTACTGATGTTTGATTTTAATGGTGACAAAGGGCTACTCCAATTACTCGCTTGCTAG
Upstream 100 bases:
>100_bases AAAACCATATCAATCAGTTATACGGCTGCATTCCCTTGTCAGGGAAAAGAGCATTTGTTGGTGTCTACGTCTATCACTAA GTTGGAAGAGGTGAGCGAGC
Downstream 100 bases:
>100_bases TACGAATCAGAACGTTAATATTAATGAAAACGCTCTCATAATAATGACTTTTTTTTTAATACGAGAAAACAGCATGACTG ATGTAGTGAAAGCGTAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MHNSTGRYVLGMEVMTPTGMNLDIATNVANADLARFDQVVGEDGIERFTFAKIEYTKESDLFEKTCELTANLLDSLLTQL PRSLKPIPLLLAVPTTISLVKMQEWLGESDYSDFLSVVETVHASGPSFVLQAMKSLDKYDAMMCISVDSMVNRMQELIDD NMVMSTNNPWGVIPSEGGSGLILCRRNTLETLKLKPLAQLGYIDTELNTTDRRGMYRLVQRASKKLNAFGEVYSDMTNLR AHSEDYGFALGAKAERFTHPELPMLINELWGTMGSCSSLALLAFTVKNHHFNQPSSLLMFDFNGDKGLLQLLAC
Sequences:
>Translated_314_residues MHNSTGRYVLGMEVMTPTGMNLDIATNVANADLARFDQVVGEDGIERFTFAKIEYTKESDLFEKTCELTANLLDSLLTQL PRSLKPIPLLLAVPTTISLVKMQEWLGESDYSDFLSVVETVHASGPSFVLQAMKSLDKYDAMMCISVDSMVNRMQELIDD NMVMSTNNPWGVIPSEGGSGLILCRRNTLETLKLKPLAQLGYIDTELNTTDRRGMYRLVQRASKKLNAFGEVYSDMTNLR AHSEDYGFALGAKAERFTHPELPMLINELWGTMGSCSSLALLAFTVKNHHFNQPSSLLMFDFNGDKGLLQLLAC >Mature_314_residues MHNSTGRYVLGMEVMTPTGMNLDIATNVANADLARFDQVVGEDGIERFTFAKIEYTKESDLFEKTCELTANLLDSLLTQL PRSLKPIPLLLAVPTTISLVKMQEWLGESDYSDFLSVVETVHASGPSFVLQAMKSLDKYDAMMCISVDSMVNRMQELIDD NMVMSTNNPWGVIPSEGGSGLILCRRNTLETLKLKPLAQLGYIDTELNTTDRRGMYRLVQRASKKLNAFGEVYSDMTNLR AHSEDYGFALGAKAERFTHPELPMLINELWGTMGSCSSLALLAFTVKNHHFNQPSSLLMFDFNGDKGLLQLLAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34973; Mature: 34973
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNSTGRYVLGMEVMTPTGMNLDIATNVANADLARFDQVVGEDGIERFTFAKIEYTKESD CCCCCCCEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHEEEEEEEECCHHH LFEKTCELTANLLDSLLTQLPRSLKPIPLLLAVPTTISLVKMQEWLGESDYSDFLSVVET HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHH VHASGPSFVLQAMKSLDKYDAMMCISVDSMVNRMQELIDDNMVMSTNNPWGVIPSEGGSG HHCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCE LILCRRNTLETLKLKPLAQLGYIDTELNTTDRRGMYRLVQRASKKLNAFGEVYSDMTNLR EEEEECCCCCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHSEDYGFALGAKAERFTHPELPMLINELWGTMGSCSSLALLAFTVKNHHFNQPSSLLMF CCCCCCCEEECCCHHHCCCCCHHHHHHHHHHCCCCHHHHHHHEEEHHCCCCCCCCCEEEE DFNGDKGLLQLLAC EECCCHHHHHHHCC >Mature Secondary Structure MHNSTGRYVLGMEVMTPTGMNLDIATNVANADLARFDQVVGEDGIERFTFAKIEYTKESD CCCCCCCEEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHEEEEEEEECCHHH LFEKTCELTANLLDSLLTQLPRSLKPIPLLLAVPTTISLVKMQEWLGESDYSDFLSVVET HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHH VHASGPSFVLQAMKSLDKYDAMMCISVDSMVNRMQELIDDNMVMSTNNPWGVIPSEGGSG HHCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCE LILCRRNTLETLKLKPLAQLGYIDTELNTTDRRGMYRLVQRASKKLNAFGEVYSDMTNLR EEEEECCCCCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHSEDYGFALGAKAERFTHPELPMLINELWGTMGSCSSLALLAFTVKNHHFNQPSSLLMF CCCCCCCEEECCCHHHCCCCCHHHHHHHHHHCCCCHHHHHHHEEEHHCCCCCCCCCEEEE DFNGDKGLLQLLAC EECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA