| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is insG [H]
Identifier: 156976955
GI number: 156976955
Start: 942445
End: 943596
Strand: Reverse
Name: insG [H]
Synonym: VIBHAR_05740
Alternate gene names: 156976955
Gene position: 943596-942445 (Counterclockwise)
Preceding gene: 156976960
Following gene: 156976945
Centisome position: 42.81
GC content: 43.32
Gene sequence:
>1152_bases ATGGCAATCTATAACGATAAATCCATGGCTGACATTGTAAATATGCTCGATATTGTTGACCGCACAGGTAAACCATTTGT TGCTCCAAGTGCATTAACACAGCGAAGAAAAAACCTTGGTGAGTCAGCGGCTAAAGCTCTTTTTGAGTGTACCCAGAGTC ATTGGTTTAAACAGGCTAATTTACCAAACTGGAACGGACTCACTCTTCTTGGCGTTGATGGTGTCTTGTGGCGAACTGAG GATTCAAAAGAGAACGCTGCAACGTTTGCAAAGCCTACCAATCGTGACGGAAAAGAAACACAGTACCCACAAGTACGCAT GGTATGTCAGATGGAATTGAGCAGCCATTTAATCACAGGCAGTGCCTTTGACTGTTATAGCGTCAATGAAATGAAGTTAG CAGAGCAACTGATAGAGACGACACCTGATAATAGTTTAACCCTTTTTGATAAAGGCTTTTACTCCCTTGGCCTACTTCAA GCATGGAGCTCGCAAGGCATAAATCGACATTGGCTTATCCCAATGAAAAAAGGACTTACTTATGACGTCGTTCAGTCTCT TGGCCGCCAAGATAAACTGATAAAGCTGAAGAGTAATCCGCAAGCACGTAAAAAGTGGCCAGAGCTAGAACAAGAAGTGG TTGTACGTTTAATCACGAGAGTCAAAGATGGCAAGCAATACGATGTTCTCACCTCAATGCTTAACCCTATGCTCTACCCA AAGTCAGATATCGTAGGCTTATATGGGTATCGTTGGGAAATTGAACTCGGATACCGTGAGCAAAAACAGTACATGCTTGG TAACCGACTCACGCTTCGAAGTCGACTCCCTGAATTAGTGAAGCAAGAACTCTGGGGAATACTACTGACCTATAACTTGA TCAGGTATCAAATGGTGCAGATGTGTAATACGTTGAATGGTGATTACTTGCCATATCAACTTAGCTTCAATGGAGCACTA GCTCACATCATGCGCCTGATAGTGGGACTTCCATACTCGTCACCAGGAGCAATCCCGAGGCAACTCGAAAACTTCTACTC AATGAGTGAGAGCTTAATACTTGAACCTAGGAGAGAAAGATCCTTCCCTAGAGTCGTTAAGAAAAAGCCAAGCCGATACC CTAGAAAAAACAATGCCGATCACCTTAAGTGA
Upstream 100 bases:
>100_bases TTTTCTAGTCATAATCTGTTCCAGTATTTTTAGGTACTATACAAACAGATCAATCACTTAAAGTCATGTCCGAAAATTGG GGGCCACTTCTCTGGTTGGA
Downstream 100 bases:
>100_bases ACGGCATTAGGGTCTGTGCCCTGCTCTTTGTAATTTCTTAGTCTTGTTTCTTTGCGGCGTATTCTGCTCGAATTTGCTCT GCAACGATCTTAATCGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MAIYNDKSMADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQANLPNWNGLTLLGVDGVLWRTE DSKENAATFAKPTNRDGKETQYPQVRMVCQMELSSHLITGSAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQ AWSSQGINRHWLIPMKKGLTYDVVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLNPMLYP KSDIVGLYGYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQMCNTLNGDYLPYQLSFNGAL AHIMRLIVGLPYSSPGAIPRQLENFYSMSESLILEPRRERSFPRVVKKKPSRYPRKNNADHLK
Sequences:
>Translated_383_residues MAIYNDKSMADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQANLPNWNGLTLLGVDGVLWRTE DSKENAATFAKPTNRDGKETQYPQVRMVCQMELSSHLITGSAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQ AWSSQGINRHWLIPMKKGLTYDVVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLNPMLYP KSDIVGLYGYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQMCNTLNGDYLPYQLSFNGAL AHIMRLIVGLPYSSPGAIPRQLENFYSMSESLILEPRRERSFPRVVKKKPSRYPRKNNADHLK >Mature_382_residues AIYNDKSMADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQANLPNWNGLTLLGVDGVLWRTED SKENAATFAKPTNRDGKETQYPQVRMVCQMELSSHLITGSAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQA WSSQGINRHWLIPMKKGLTYDVVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLNPMLYPK SDIVGLYGYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQMCNTLNGDYLPYQLSFNGALA HIMRLIVGLPYSSPGAIPRQLENFYSMSESLILEPRRERSFPRVVKKKPSRYPRKNNADHLK
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=374, Percent_Identity=52.4064171122995, Blast_Score=396, Evalue=1e-111,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 44155; Mature: 44023
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYNDKSMADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQAN CCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPNWNGLTLLGVDGVLWRTEDSKENAATFAKPTNRDGKETQYPQVRMVCQMELSSHLITG CCCCCCEEEEECCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECC SAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGINRHWLIPMKKGLT CCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCC YDVVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLNPMLYP HHHHHHCCCCCCEEEECCCCHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC KSDIVGLYGYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQ CCCEEEEEEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCNTLNGDYLPYQLSFNGALAHIMRLIVGLPYSSPGAIPRQLENFYSMSESLILEPRRER HHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHC SFPRVVKKKPSRYPRKNNADHLK CCHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AIYNDKSMADIVNMLDIVDRTGKPFVAPSALTQRRKNLGESAAKALFECTQSHWFKQAN CEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPNWNGLTLLGVDGVLWRTEDSKENAATFAKPTNRDGKETQYPQVRMVCQMELSSHLITG CCCCCCEEEEECCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECC SAFDCYSVNEMKLAEQLIETTPDNSLTLFDKGFYSLGLLQAWSSQGINRHWLIPMKKGLT CCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCC YDVVQSLGRQDKLIKLKSNPQARKKWPELEQEVVVRLITRVKDGKQYDVLTSMLNPMLYP HHHHHHCCCCCCEEEECCCCHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC KSDIVGLYGYRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVQ CCCEEEEEEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCNTLNGDYLPYQLSFNGALAHIMRLIVGLPYSSPGAIPRQLENFYSMSESLILEPRRER HHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHC SFPRVVKKKPSRYPRKNNADHLK CCHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]