| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976943
Identifier: 156976943
GI number: 156976943
Start: 930517
End: 930954
Strand: Reverse
Name: 156976943
Synonym: VIBHAR_05728
Alternate gene names: NA
Gene position: 930954-930517 (Counterclockwise)
Preceding gene: 156976945
Following gene: 156976938
Centisome position: 42.24
GC content: 40.41
Gene sequence:
>438_bases ATGTCAGAAGCAACTAACAACGAAAGCAAAAAAATCGATCTAGAAACTATTTCTCCAGAACTACGTAAAGTTATCGAATT TGACGAAGTTCCTGAGCAAATGTTTGAGATGGTTACCTCTATCCATGAAGTGTCTGAAGAAGCTGTTCGTGAATCTTGGA ATGAAATGCCAGCAAGTGCACAAAACATTCTGGACAACTTCGAGCAATTCCACGCTCTAGTATCTGTAGGCCAAGCTTTC GCTGGTCTAAACGTAATGGAAGAATTCCCGACCCTAAACCTGCCAGAAAACATGACAGATGAAGATAAAGAAGACTACCG TGCTCAACTGCTAGACAATGTTCTACACAACTGCGTGAAAGACATGGTTAAGCAACTTAAAAAAGCACGTCGTGATCCTC TTCTTAAGCGTGAATTCAAAGAAGTATTCGTGAAGTAA
Upstream 100 bases:
>100_bases TGGTATTAATATTCCCGCCTTTTGTAGCAAGAGCCACTCGAATCTCGTTACAACATGCACTATAAATAATGTGCGCTTTT ATGTACTAACAGGACTCACC
Downstream 100 bases:
>100_bases TTCCGACACTCTCTTTAATAATAAAGGCCGCACCTGCGGCCTTTTGTGTATCTGTGGTCTTTTGCGTATCTGCGGTTTAG TCAATTTAATGGTACGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSEATNNESKKIDLETISPELRKVIEFDEVPEQMFEMVTSIHEVSEEAVRESWNEMPASAQNILDNFEQFHALVSVGQAF AGLNVMEEFPTLNLPENMTDEDKEDYRAQLLDNVLHNCVKDMVKQLKKARRDPLLKREFKEVFVK
Sequences:
>Translated_145_residues MSEATNNESKKIDLETISPELRKVIEFDEVPEQMFEMVTSIHEVSEEAVRESWNEMPASAQNILDNFEQFHALVSVGQAF AGLNVMEEFPTLNLPENMTDEDKEDYRAQLLDNVLHNCVKDMVKQLKKARRDPLLKREFKEVFVK >Mature_144_residues SEATNNESKKIDLETISPELRKVIEFDEVPEQMFEMVTSIHEVSEEAVRESWNEMPASAQNILDNFEQFHALVSVGQAFA GLNVMEEFPTLNLPENMTDEDKEDYRAQLLDNVLHNCVKDMVKQLKKARRDPLLKREFKEVFVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16846; Mature: 16715
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEATNNESKKIDLETISPELRKVIEFDEVPEQMFEMVTSIHEVSEEAVRESWNEMPASA CCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH QNILDNFEQFHALVSVGQAFAGLNVMEEFPTLNLPENMTDEDKEDYRAQLLDNVLHNCVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DMVKQLKKARRDPLLKREFKEVFVK HHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SEATNNESKKIDLETISPELRKVIEFDEVPEQMFEMVTSIHEVSEEAVRESWNEMPASA CCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH QNILDNFEQFHALVSVGQAFAGLNVMEEFPTLNLPENMTDEDKEDYRAQLLDNVLHNCVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DMVKQLKKARRDPLLKREFKEVFVK HHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA