| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976834
Identifier: 156976834
GI number: 156976834
Start: 813328
End: 813900
Strand: Reverse
Name: 156976834
Synonym: VIBHAR_05610
Alternate gene names: NA
Gene position: 813900-813328 (Counterclockwise)
Preceding gene: 156976846
Following gene: 156976832
Centisome position: 36.93
GC content: 45.38
Gene sequence:
>573_bases ATGAAAAAGGCTTTCTCTACTCTAAACATCGTAGTCGCACTGTTTTCTAGTGCCGCATCCGCTGCAGACAACTACACTCT TGATTCCGATCTCTCTTCCCTAAGCTTCGCAACAATCAAAAAGCAGTATATTGTCGAGCCAGCAACCATTGATGCCCTAT CCGGCACACTTAACAGTGATGGGCAATTTGACGTCGCTATCGACCTAAACAGCATCAATACAGGTATTCCAATCCGAAAC ACACGCCTGAATGAGATCTTCTTTGAATCTGCAAAACACGCACCAGTAAAAGTGGCAGGAAAAGTGGATTGGGCCGCTCT GGGTGAAGGCTCACACAAGGTAAAAGTACCGGCTGAAGTGACGTTGTTTGGTAAGACGAAATCCGTAGAATTCCCTGTTG TGGTTCTCAATGCAGGTAATACGGTCATGGTAAGTTCAAGTGCACCTGTCATCATCGGTGCTAGTGATTTTGGTATCCCA ACGGAAAACTTGACCAACTTGGCGGCAACGGTTGGTGGAATTAAGATTTCGGATAGAGTTCCACTTGCTCTGAACCTAAC CTTTAAAAAGTAG
Upstream 100 bases:
>100_bases AAAATCATTGAAATCAATCGATTTAATTCCTTATTAACTTTTATAAATCCGAACTACTATCATGGAAAACCATCGCTCAA CATCAATAAGGTTAACAATA
Downstream 100 bases:
>100_bases TTTAGTAGCCCAAAAGCGGCTTGCTAACTGGAAACAAAGGCTTGGATAGGCTCACCAAGCCTTTTTTATGCGCTATCAAA CAAACCTTTCTTTAAGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: YceI Like Family Protein; YceI Like Family
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKKAFSTLNIVVALFSSAASAADNYTLDSDLSSLSFATIKKQYIVEPATIDALSGTLNSDGQFDVAIDLNSINTGIPIRN TRLNEIFFESAKHAPVKVAGKVDWAALGEGSHKVKVPAEVTLFGKTKSVEFPVVVLNAGNTVMVSSSAPVIIGASDFGIP TENLTNLAATVGGIKISDRVPLALNLTFKK
Sequences:
>Translated_190_residues MKKAFSTLNIVVALFSSAASAADNYTLDSDLSSLSFATIKKQYIVEPATIDALSGTLNSDGQFDVAIDLNSINTGIPIRN TRLNEIFFESAKHAPVKVAGKVDWAALGEGSHKVKVPAEVTLFGKTKSVEFPVVVLNAGNTVMVSSSAPVIIGASDFGIP TENLTNLAATVGGIKISDRVPLALNLTFKK >Mature_190_residues MKKAFSTLNIVVALFSSAASAADNYTLDSDLSSLSFATIKKQYIVEPATIDALSGTLNSDGQFDVAIDLNSINTGIPIRN TRLNEIFFESAKHAPVKVAGKVDWAALGEGSHKVKVPAEVTLFGKTKSVEFPVVVLNAGNTVMVSSSAPVIIGASDFGIP TENLTNLAATVGGIKISDRVPLALNLTFKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19969; Mature: 19969
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAFSTLNIVVALFSSAASAADNYTLDSDLSSLSFATIKKQYIVEPATIDALSGTLNSD CCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHEEEHHHHEECCCEEEEECCCCCCC GQFDVAIDLNSINTGIPIRNTRLNEIFFESAKHAPVKVAGKVDWAALGEGSHKVKVPAEV CCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCEEEECCCCCEEECCEEE TLFGKTKSVEFPVVVLNAGNTVMVSSSAPVIIGASDFGIPTENLTNLAATVGGIKISDRV EEEECCCCCCCCEEEECCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCEEECCCC PLALNLTFKK CEEEEEEECC >Mature Secondary Structure MKKAFSTLNIVVALFSSAASAADNYTLDSDLSSLSFATIKKQYIVEPATIDALSGTLNSD CCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHEEEHHHHEECCCEEEEECCCCCCC GQFDVAIDLNSINTGIPIRNTRLNEIFFESAKHAPVKVAGKVDWAALGEGSHKVKVPAEV CCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCEEEECCCCCEEECCEEE TLFGKTKSVEFPVVVLNAGNTVMVSSSAPVIIGASDFGIPTENLTNLAATVGGIKISDRV EEEECCCCCCCCEEEECCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCEEECCCC PLALNLTFKK CEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA