Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976810

Identifier: 156976810

GI number: 156976810

Start: 790785

End: 791366

Strand: Direct

Name: 156976810

Synonym: VIBHAR_05586

Alternate gene names: NA

Gene position: 790785-791366 (Clockwise)

Preceding gene: 156976809

Following gene: 156976811

Centisome position: 35.88

GC content: 44.5

Gene sequence:

>582_bases
ATGACTCAATCAACGTCAAAAACACCCATTATAGTATGCTGCGATAGCCTCCAAGAGCAGGCTCGATTGTCCGGTTTGTT
GAGCAAAGATTACGACAACATCATTGGCTGCCAATTGGCACAACTAGAAACGCTTATGCAGCGAGAACCGTCAGCAAGCG
TTGTGGTTGGATGGCAGCAACCAACCGCGGAACTGCGTTTGATCGTCGATTTCTGCCGCAGAAAATCGGCACCACTTCTT
ATCGTTTTAAAGCAGTTATCATCTAATGATATCAATCGGTTATCGGAAAAAATGGACTATGTGCTCATGCCGCATGATAG
TGAGTTTGCACTTCAACCTTGGATTGAACATGCGACATTAGTGAGAGCGAAATTCGAAAGTATGCAATCGGAAATTGAAT
CGCTGACCCACAAGATTGAAGAGCGCAAGCTGGTGGAAAAAGCTAAAGGTCTGCTGATGAAGATGCACAGCGTTGATGAA
GATCAGGCTTATAAAGCGCTTAGAAATTCAGCCATGCAATCGAGCCAAACGCTCGCACAAGTTGCCAAGAATTTGATAAC
TACTTTGGAAGTGTTGGATTAG

Upstream 100 bases:

>100_bases
TTCAAAGAACATCTCGCCTCTAGTTAAAACGCTTCAACTTTAGTTGGCACATTCCTTGTTATGTCTCTCTTAGTGAGTGA
GATATAAACAAGGAATGTGC

Downstream 100 bases:

>100_bases
TTGCTCTACCACTTTGGGGTTAGGGCGCATTTTCTAACGTGGTGCGTGTTGCACTATCAGCAAGCAATAACAGGGAATAA
GAAACGGTAGAACAAGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Response Regulator ReceiverANTAR; Response Regulator; Response Regulator Receiver/ANTAR Domain-Containing Protein

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTQSTSKTPIIVCCDSLQEQARLSGLLSKDYDNIIGCQLAQLETLMQREPSASVVVGWQQPTAELRLIVDFCRRKSAPLL
IVLKQLSSNDINRLSEKMDYVLMPHDSEFALQPWIEHATLVRAKFESMQSEIESLTHKIEERKLVEKAKGLLMKMHSVDE
DQAYKALRNSAMQSSQTLAQVAKNLITTLEVLD

Sequences:

>Translated_193_residues
MTQSTSKTPIIVCCDSLQEQARLSGLLSKDYDNIIGCQLAQLETLMQREPSASVVVGWQQPTAELRLIVDFCRRKSAPLL
IVLKQLSSNDINRLSEKMDYVLMPHDSEFALQPWIEHATLVRAKFESMQSEIESLTHKIEERKLVEKAKGLLMKMHSVDE
DQAYKALRNSAMQSSQTLAQVAKNLITTLEVLD
>Mature_192_residues
TQSTSKTPIIVCCDSLQEQARLSGLLSKDYDNIIGCQLAQLETLMQREPSASVVVGWQQPTAELRLIVDFCRRKSAPLLI
VLKQLSSNDINRLSEKMDYVLMPHDSEFALQPWIEHATLVRAKFESMQSEIESLTHKIEERKLVEKAKGLLMKMHSVDED
QAYKALRNSAMQSSQTLAQVAKNLITTLEVLD

Specific function: Unknown

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21833; Mature: 21701

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50921 ANTAR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSTSKTPIIVCCDSLQEQARLSGLLSKDYDNIIGCQLAQLETLMQREPSASVVVGWQQ
CCCCCCCCCEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
PTAELRLIVDFCRRKSAPLLIVLKQLSSNDINRLSEKMDYVLMPHDSEFALQPWIEHATL
CHHHHHHHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHH
VRAKFESMQSEIESLTHKIEERKLVEKAKGLLMKMHSVDEDQAYKALRNSAMQSSQTLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VAKNLITTLEVLD
HHHHHHHHHHHCC
>Mature Secondary Structure 
TQSTSKTPIIVCCDSLQEQARLSGLLSKDYDNIIGCQLAQLETLMQREPSASVVVGWQQ
CCCCCCCCEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
PTAELRLIVDFCRRKSAPLLIVLKQLSSNDINRLSEKMDYVLMPHDSEFALQPWIEHATL
CHHHHHHHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHH
VRAKFESMQSEIESLTHKIEERKLVEKAKGLLMKMHSVDEDQAYKALRNSAMQSSQTLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VAKNLITTLEVLD
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA