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The map label for this gene is etfB [H]

Identifier: 156976773

GI number: 156976773

Start: 753632

End: 754381

Strand: Direct

Name: etfB [H]

Synonym: VIBHAR_05548

Alternate gene names: 156976773

Gene position: 753632-754381 (Clockwise)

Preceding gene: 156976770

Following gene: 156976774

Centisome position: 34.19

GC content: 48.27

Gene sequence:

>750_bases
GTGAAAGTACTGGTTGCGATTAAACGTGTAGTTGATCCTTACGTGAAAGTTAGGGTGAAATCGGATGGTTCCGGCGTGGA
AACCAACAACGTAAAAATGACGATGAATCCGTTCTGTGAAATTGCGGTGGAAGAGGCTGTACGCCTAAAAGAATCCGGCG
TTGCGGAAGAGGTGCTAGTGGTCTCGATTGGAGATACTAGCTGTCAGGAGCAATTACGTTCAGCACTGGCGCTGGGTGCA
GACCGTGCGATCCATATCGATGTTGAGCTGCCGCCAGAGCCTCTTGTGGTAGCGAAGTTGCTCAAAGTCGTTATGGAGCA
AGAACAGGCTCAACTGGTGCTTTTGGGTAAGCAGTCAATCGATACAGATAACAACCAAGTTGCGCAAATGTTGGCTGCAT
TGACGAATCGTCCTCAAGGAACATTTGCATCGGAAGTGAAAGTCGAAGGGGAAACGGCTTTTGTTACGAGAGAAATTGAT
GGCGGTTTAGAGACGCTCAAGCTGGATTTGCCTGCCATTATCAGCACAGATTTGCGTCTAAATGAGCCGCGTTATGCCTC
TCTACCGAACATCATGAAAGCGAAGAAGAAGCCTTTGTCTGTGATGACACCAGACTTCTTTGATGTGAGTGTTGAACGCT
CCCAACAGGTACTTGAAGTCATGACACCGCCTGCACGAAAAGCGGGCGAAATGGTAGGCAGTGTGAGCGAGTTAGTCGAC
AAGCTCAAAAACGAAGCGAAAGTGATTTAG

Upstream 100 bases:

>100_bases
AAGCAACACGATGAAAATGCTTAGCTTTAATGAAAATCTTGGTCACGTATGACCCAATTGCTAGGACGCGTATCGCTATT
GCGATCTGCTAGGAGGGAAT

Downstream 100 bases:

>100_bases
GAGGCATAATCATGGAAAACAAACCGTTAGCAACCTTGGTCATTGTGGAACACGATAACCAATCACTTTCAGTGGATACA
TTACGCGCATTGAGTGCGGC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVAIKRVVDPYVKVRVKSDGSGVETNNVKMTMNPFCEIAVEEAVRLKESGVAEEVLVVSIGDTSCQEQLRSALALGA
DRAIHIDVELPPEPLVVAKLLKVVMEQEQAQLVLLGKQSIDTDNNQVAQMLAALTNRPQGTFASEVKVEGETAFVTREID
GGLETLKLDLPAIISTDLRLNEPRYASLPNIMKAKKKPLSVMTPDFFDVSVERSQQVLEVMTPPARKAGEMVGSVSELVD
KLKNEAKVI

Sequences:

>Translated_249_residues
MKVLVAIKRVVDPYVKVRVKSDGSGVETNNVKMTMNPFCEIAVEEAVRLKESGVAEEVLVVSIGDTSCQEQLRSALALGA
DRAIHIDVELPPEPLVVAKLLKVVMEQEQAQLVLLGKQSIDTDNNQVAQMLAALTNRPQGTFASEVKVEGETAFVTREID
GGLETLKLDLPAIISTDLRLNEPRYASLPNIMKAKKKPLSVMTPDFFDVSVERSQQVLEVMTPPARKAGEMVGSVSELVD
KLKNEAKVI
>Mature_249_residues
MKVLVAIKRVVDPYVKVRVKSDGSGVETNNVKMTMNPFCEIAVEEAVRLKESGVAEEVLVVSIGDTSCQEQLRSALALGA
DRAIHIDVELPPEPLVVAKLLKVVMEQEQAQLVLLGKQSIDTDNNQVAQMLAALTNRPQGTFASEVKVEGETAFVTREID
GGLETLKLDLPAIISTDLRLNEPRYASLPNIMKAKKKPLSVMTPDFFDVSVERSQQVLEVMTPPARKAGEMVGSVSELVD
KLKNEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=254, Percent_Identity=55.5118110236221, Blast_Score=270, Evalue=1e-72,
Organism=Homo sapiens, GI62420877, Length=239, Percent_Identity=54.8117154811716, Blast_Score=249, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=52.1739130434783, Blast_Score=233, Evalue=8e-62,
Organism=Saccharomyces cerevisiae, GI6321646, Length=256, Percent_Identity=44.53125, Blast_Score=195, Evalue=5e-51,
Organism=Drosophila melanogaster, GI24651147, Length=253, Percent_Identity=52.5691699604743, Blast_Score=231, Evalue=4e-61,
Organism=Drosophila melanogaster, GI24651145, Length=253, Percent_Identity=52.5691699604743, Blast_Score=231, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27177; Mature: 27177

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVAIKRVVDPYVKVRVKSDGSGVETNNVKMTMNPFCEIAVEEAVRLKESGVAEEVLV
CHHHHHHHHHHCHHHEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCEEEE
VSIGDTSCQEQLRSALALGADRAIHIDVELPPEPLVVAKLLKVVMEQEQAQLVLLGKQSI
EEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
DTDNNQVAQMLAALTNRPQGTFASEVKVEGETAFVTREIDGGLETLKLDLPAIISTDLRL
CCCHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEECCCHHHCCCCEE
NEPRYASLPNIMKAKKKPLSVMTPDFFDVSVERSQQVLEVMTPPARKAGEMVGSVSELVD
CCCCCCCCCHHHHHCCCCCEEECCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLKNEAKVI
HHHHHCCCC
>Mature Secondary Structure
MKVLVAIKRVVDPYVKVRVKSDGSGVETNNVKMTMNPFCEIAVEEAVRLKESGVAEEVLV
CHHHHHHHHHHCHHHEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCEEEE
VSIGDTSCQEQLRSALALGADRAIHIDVELPPEPLVVAKLLKVVMEQEQAQLVLLGKQSI
EEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
DTDNNQVAQMLAALTNRPQGTFASEVKVEGETAFVTREIDGGLETLKLDLPAIISTDLRL
CCCHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEECCCHHHCCCCEE
NEPRYASLPNIMKAKKKPLSVMTPDFFDVSVERSQQVLEVMTPPARKAGEMVGSVSELVD
CCCCCCCCCHHHHHCCCCCEEECCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLKNEAKVI
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]