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The map label for this gene is ycgG [H]

Identifier: 156976770

GI number: 156976770

Start: 750112

End: 751632

Strand: Direct

Name: ycgG [H]

Synonym: VIBHAR_05545

Alternate gene names: 156976770

Gene position: 750112-751632 (Clockwise)

Preceding gene: 156976769

Following gene: 156976773

Centisome position: 34.03

GC content: 43.2

Gene sequence:

>1521_bases
ATGTTTGCAAACAGTAAGAAAAATTCAACGAATCTAGTTTTGCTCTCTTTTCTTCCGAGCCTTTTCGCGCTGGCGTTTTT
GTATTTCAGCTTTGGTCAGTCACTTGATGAGTTATCTCAGTTAAAAGCGTCGAGTGTGGTCCAAGAGGTCGATGAGATTC
TGGAGTATGGTGAAGAGGCTAACAACCAATCCTTGATGCTTTTGGAGAATCCCGATAGCTGTGAGGCTCACAGTGTGGCT
TTGCGCCATTTGGTCGCGACAGTGCCGTATGTACGAAGTGCCAACCTAGCCAAAGATAATGTGATTTACTGTACCTCGAT
CTGGGGAGACAGCCATTACCAGTACGACCTAGCAGATTACAGCTCTGGGCGTTTACGTTTAATGCATGGCAGTAAAGTCG
ATGCCAAACATCCTCTTATTGTGGTTCGATCTGAGTCGGGTGAGAATACCGCATTTAGTGGGATAGATAGCCTGTACTTG
AGGCAGTTGTTAGAGCCTCACGACAAGTTGCACTCATACTTGGCTGTAGGTGAACAGTGGCTCGATAGCAAAGACCTTGT
GCTTAAAGTTAACCCAGCGGACAGGCTGGTCGCTTGGCATAAAGTGTCATCAGCTAACTTTCCTTACAGTGTGTATTCGG
GGTTTGATTACCCTAGTATGATTTCTGCATTTTGGGAGCAAGATAATCAATATATTGTTGCTATCTTAATCATTCAGACG
CTCTTTGCGCTTTACCTTCTGTGGCTATCAAGACGTCCATCAAACTTATACCTAGAGATAGAGAGGGCGATGGAAAACAA
AGAGTTTGTCCCTTACGCACAGCCTATTTTGAACAGTGCAAACAGAGAGATTCAGGGAATTGAAATCCTTTTGCGTTGGC
AGCACCCAGTCCAAGGGACGGTAAGACCGGATCTTTTCATCCCTAAAGCTGAACGTTCAGGGTTGATCCTTCCGATCACA
CATCAATTGATGATACATACTGCGAAAGAAATTCGCCTATGGAAAGACAAACTACCAAAACCTTTTCATGTCGGTGTGAA
TATATCACCGCAACATTGCTCAAAAGGGACGCTTGTTAGCGCTTGCCAAGAATTCATCGATATTGTTGATTCTAAAGACG
TTACCTTGGTCTTAGAACTCACGGAGAGAGAGGCGTTAAATTACTGCGATTTAACCGATGAAATATTCACTCAGATAAAA
GACATGGGCTGTAAAATCGCAATCGATGATTTCGGTACAGGGCATTCTTCTTTGGTCAACTTACGTAAAGTCGATTTAGA
TTATCTTAAGATTGATCAAACGTTTGTACGAGATATTGGCGTTGATACGATAACCGGTCACTTATTACAGAATATGATTA
CTTTGTCTCATGACTTGTCGCTGGATGTGGTCGCTGAAGGGGTAGAAACGGAATTTCAAGCGGAGTACTTGAAGGAGAGA
GGCGTAAGCTATCTACAAGGGTTCTTGTTTGCTAAGCCTATGCCGCTTAAAGAATTTTTGAGTAACGAGTTTGATACTTA
G

Upstream 100 bases:

>100_bases
GGCTCTTTGGCATCTCGAATTAATGATAATTTTCAGGTTCTCAAGCCTGCATCTTCAAGTTGATTCGGTATAAACATATA
TCCCATTAACTAGGCCTTTC

Downstream 100 bases:

>100_bases
ACTGACCGACTCATTAAGCTAGCGCAACAGCTTAACCATTGCGCTAGTCATTCATTGGTTACATGTTCTGATAACTCGGT
CCGCCGCCACCCTCTGGTGC

Product: sensory transduction protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MFANSKKNSTNLVLLSFLPSLFALAFLYFSFGQSLDELSQLKASSVVQEVDEILEYGEEANNQSLMLLENPDSCEAHSVA
LRHLVATVPYVRSANLAKDNVIYCTSIWGDSHYQYDLADYSSGRLRLMHGSKVDAKHPLIVVRSESGENTAFSGIDSLYL
RQLLEPHDKLHSYLAVGEQWLDSKDLVLKVNPADRLVAWHKVSSANFPYSVYSGFDYPSMISAFWEQDNQYIVAILIIQT
LFALYLLWLSRRPSNLYLEIERAMENKEFVPYAQPILNSANREIQGIEILLRWQHPVQGTVRPDLFIPKAERSGLILPIT
HQLMIHTAKEIRLWKDKLPKPFHVGVNISPQHCSKGTLVSACQEFIDIVDSKDVTLVLELTEREALNYCDLTDEIFTQIK
DMGCKIAIDDFGTGHSSLVNLRKVDLDYLKIDQTFVRDIGVDTITGHLLQNMITLSHDLSLDVVAEGVETEFQAEYLKER
GVSYLQGFLFAKPMPLKEFLSNEFDT

Sequences:

>Translated_506_residues
MFANSKKNSTNLVLLSFLPSLFALAFLYFSFGQSLDELSQLKASSVVQEVDEILEYGEEANNQSLMLLENPDSCEAHSVA
LRHLVATVPYVRSANLAKDNVIYCTSIWGDSHYQYDLADYSSGRLRLMHGSKVDAKHPLIVVRSESGENTAFSGIDSLYL
RQLLEPHDKLHSYLAVGEQWLDSKDLVLKVNPADRLVAWHKVSSANFPYSVYSGFDYPSMISAFWEQDNQYIVAILIIQT
LFALYLLWLSRRPSNLYLEIERAMENKEFVPYAQPILNSANREIQGIEILLRWQHPVQGTVRPDLFIPKAERSGLILPIT
HQLMIHTAKEIRLWKDKLPKPFHVGVNISPQHCSKGTLVSACQEFIDIVDSKDVTLVLELTEREALNYCDLTDEIFTQIK
DMGCKIAIDDFGTGHSSLVNLRKVDLDYLKIDQTFVRDIGVDTITGHLLQNMITLSHDLSLDVVAEGVETEFQAEYLKER
GVSYLQGFLFAKPMPLKEFLSNEFDT
>Mature_506_residues
MFANSKKNSTNLVLLSFLPSLFALAFLYFSFGQSLDELSQLKASSVVQEVDEILEYGEEANNQSLMLLENPDSCEAHSVA
LRHLVATVPYVRSANLAKDNVIYCTSIWGDSHYQYDLADYSSGRLRLMHGSKVDAKHPLIVVRSESGENTAFSGIDSLYL
RQLLEPHDKLHSYLAVGEQWLDSKDLVLKVNPADRLVAWHKVSSANFPYSVYSGFDYPSMISAFWEQDNQYIVAILIIQT
LFALYLLWLSRRPSNLYLEIERAMENKEFVPYAQPILNSANREIQGIEILLRWQHPVQGTVRPDLFIPKAERSGLILPIT
HQLMIHTAKEIRLWKDKLPKPFHVGVNISPQHCSKGTLVSACQEFIDIVDSKDVTLVLELTEREALNYCDLTDEIFTQIK
DMGCKIAIDDFGTGHSSLVNLRKVDLDYLKIDQTFVRDIGVDTITGHLLQNMITLSHDLSLDVVAEGVETEFQAEYLKER
GVSYLQGFLFAKPMPLKEFLSNEFDT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential). Note=Found associated with the RNA degradosome [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=455, Percent_Identity=29.2307692307692, Blast_Score=211, Evalue=1e-55,
Organism=Escherichia coli, GI87081980, Length=477, Percent_Identity=31.4465408805031, Blast_Score=202, Evalue=4e-53,
Organism=Escherichia coli, GI1788502, Length=448, Percent_Identity=29.9107142857143, Blast_Score=196, Evalue=4e-51,
Organism=Escherichia coli, GI1786507, Length=242, Percent_Identity=38.8429752066116, Blast_Score=189, Evalue=4e-49,
Organism=Escherichia coli, GI1787541, Length=240, Percent_Identity=34.1666666666667, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI87081743, Length=265, Percent_Identity=32.8301886792453, Blast_Score=148, Evalue=7e-37,
Organism=Escherichia coli, GI1790496, Length=244, Percent_Identity=32.7868852459016, Blast_Score=136, Evalue=4e-33,
Organism=Escherichia coli, GI226510982, Length=247, Percent_Identity=30.7692307692308, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI87081921, Length=243, Percent_Identity=30.8641975308642, Blast_Score=119, Evalue=6e-28,
Organism=Escherichia coli, GI1788849, Length=247, Percent_Identity=31.1740890688259, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI87082096, Length=243, Percent_Identity=30.4526748971193, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1787055, Length=257, Percent_Identity=30.3501945525292, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 57436; Mature: 57436

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFANSKKNSTNLVLLSFLPSLFALAFLYFSFGQSLDELSQLKASSVVQEVDEILEYGEEA
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
NNQSLMLLENPDSCEAHSVALRHLVATVPYVRSANLAKDNVIYCTSIWGDSHYQYDLADY
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEECCCCCEEEEECCC
SSGRLRLMHGSKVDAKHPLIVVRSESGENTAFSGIDSLYLRQLLEPHDKLHSYLAVGEQW
CCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LDSKDLVLKVNPADRLVAWHKVSSANFPYSVYSGFDYPSMISAFWEQDNQYIVAILIIQT
CCCCCEEEEECCHHHEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHCCCCEEHHHHHHHH
LFALYLLWLSRRPSNLYLEIERAMENKEFVPYAQPILNSANREIQGIEILLRWQHPVQGT
HHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCC
VRPDLFIPKAERSGLILPITHQLMIHTAKEIRLWKDKLPKPFHVGVNISPQHCSKGTLVS
CCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEECEECCHHHCCCCHHHH
ACQEFIDIVDSKDVTLVLELTEREALNYCDLTDEIFTQIKDMGCKIAIDDFGTGHSSLVN
HHHHHHHHHCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHH
LRKVDLDYLKIDQTFVRDIGVDTITGHLLQNMITLSHDLSLDVVAEGVETEFQAEYLKER
HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHC
GVSYLQGFLFAKPMPLKEFLSNEFDT
CHHHHHHHHHCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MFANSKKNSTNLVLLSFLPSLFALAFLYFSFGQSLDELSQLKASSVVQEVDEILEYGEEA
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
NNQSLMLLENPDSCEAHSVALRHLVATVPYVRSANLAKDNVIYCTSIWGDSHYQYDLADY
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEECCCCCEEEEECCC
SSGRLRLMHGSKVDAKHPLIVVRSESGENTAFSGIDSLYLRQLLEPHDKLHSYLAVGEQW
CCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LDSKDLVLKVNPADRLVAWHKVSSANFPYSVYSGFDYPSMISAFWEQDNQYIVAILIIQT
CCCCCEEEEECCHHHEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHCCCCEEHHHHHHHH
LFALYLLWLSRRPSNLYLEIERAMENKEFVPYAQPILNSANREIQGIEILLRWQHPVQGT
HHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCC
VRPDLFIPKAERSGLILPITHQLMIHTAKEIRLWKDKLPKPFHVGVNISPQHCSKGTLVS
CCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEECEECCHHHCCCCHHHH
ACQEFIDIVDSKDVTLVLELTEREALNYCDLTDEIFTQIKDMGCKIAIDDFGTGHSSLVN
HHHHHHHHHCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHH
LRKVDLDYLKIDQTFVRDIGVDTITGHLLQNMITLSHDLSLDVVAEGVETEFQAEYLKER
HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHC
GVSYLQGFLFAKPMPLKEFLSNEFDT
CHHHHHHHHHCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]