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The map label for this gene is ygcN [C]

Identifier: 156976771

GI number: 156976771

Start: 751691

End: 753355

Strand: Reverse

Name: ygcN [C]

Synonym: VIBHAR_05546

Alternate gene names: 156976771

Gene position: 753355-751691 (Counterclockwise)

Preceding gene: 156976772

Following gene: 156976762

Centisome position: 34.18

GC content: 48.11

Gene sequence:

>1665_bases
ATGATGGAACGAGAATGCATGGAATTTGATGTTGTAATTGTTGGCGCAGGACCTGCTGGGTTGAGTGCCGCCTGTCGATT
AGCGCAACTCAATCAAGAGCGAGAGGATGAGCCGCTTTCTATTTGTGTGGTTGAAAAAGGTTCAGAAGTTGGCGCCCACA
TTTTATCTGGCGCGGTATTTGAGACTCATGCGTTGGATGAACTCTTTCCAGACTGGCAGAGCATGGGCGCGCCTCTCTCG
GTATTCGTAAAAAACGACGCCTTCTTATACTTAACGACAGAGCTCAACCACGTCCGCGTGCCTCACTTTCTGACGCCAAA
CCCAATGCTTAACGATGAAAACAACTACGTTATCAGCTTGGCAAACTTGTGTCGTTGGTTAGCAGAGCAAGCGGAATCGC
TCGGTGTCGAGGTCTATCCCGGCTTCGCGGCTTCCACCATAAACTACGACGAATCAGGTGCAGTAACTGGAGTAAATACC
AGTGACATGGGCTTGGATAAGCAAGGGGAAGCCAAACCCAACTTTGAAGCGGGTATCGAGTTAAAAGCCAAATACACTGT
ATTCGCCGAGGGGTGCCGAGGCCACCTTGGTAAAGAGCTCATCCAACGATTTGGTTTAGACGATGATAAACAACCGCAAC
ATTATGCGCTCGGGCTAAAAGAGATCTGGGAGTTACCTGCTGGCGCCAAAGATCAATCTGGCAGTGTGATCCATTCTGCA
GGGTATCCACTGAGTGAATCCAACACCACTGGTGGCGGTTTTCTTTATCACATGGAAAACAATCAAATCGCCGTTGGGCT
TATTGTCGACTTAAACTACAGCAACCCTTACTTGAGCCCATTTGACGAGTTTCAACGCTTTAAGCACCACCCTGCAATCG
AAAAACACTTAAAAGGCGCTCAACGCATCGCTTACGGAGCAAGGGCTATTGCCAAGGGTGGGCTTTCTTCTCTGCCGAAA
CAACAATTCCCCGGAGGTCTATTAATTGGTTGCGATGCAGGCACCTTGAACGTCGCCAAAATCAAAGGCAGTAACACTGC
GATGAAATCTGGCTTGCTAGCGGCAGAAGCCATAATCGAAGCATTCACACAAACAAATCCAGAACCGGATTACCAAAGCC
GATTTGAAAGCTCATGGTTGTATGAAGAACTCAGCGAGACGCGTAACTTTGGTGCGAACATTCATAAGTTCGGCAGCCTA
CTCGGCGGTACACTTTCCACCTTTGAACACAATATCTGGCAACCACTAGTCAAGAAACCAATACCATGGACAATTACCGA
TACTTCGCTCGATCATGAACAATTAAAACCGATTGACGCATGCCAACCCATTGAATACGTGAAACCTGATGGCATCATCA
GTTTCGACAAGCCCTCATCGGTGTTTTTGTCCGGAACACAGCACGAAGAAAACCAGCCATGCCATTTGCAACTCGCCTAT
CCTCATATTCCGATTCAAGTGCATTTGAAGAAGTTTGATGAGCCGAGTCAGCGTTACTGCCCTGCTGGCGTGTATGAAGT
GGTAGAAGTAGAAGGCAAGAAGTTACTCCAAATCAACGCCGCAAACTGTGTGCATTGCAAAACCTGTGACATCAAAGACC
CTTCGCAGAACATCACCTGGAAAGCACCAGAGGGTGGCGGCGGACCGAGTTATCAGAACATGTAA

Upstream 100 bases:

>100_bases
TTTACGTTTACGTCAACTGGACTATAGTTCTTTATACGAGCACTGCTTATTAAAAGAAGCACCTGAAACACGAAGAAAGG
TTTCACACAAAGGAAGCAAG

Downstream 100 bases:

>100_bases
CCAATGAATGACTAGCGCAATGGTTAAGCTGTTGCGCTAGCTTAATGAGTCGGTCAGTCTAAGTATCAAACTCGTTACTC
AAAAATTCTTTAAGCGGCAT

Product: electron transfer flavoprotein-ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MMERECMEFDVVIVGAGPAGLSAACRLAQLNQEREDEPLSICVVEKGSEVGAHILSGAVFETHALDELFPDWQSMGAPLS
VFVKNDAFLYLTTELNHVRVPHFLTPNPMLNDENNYVISLANLCRWLAEQAESLGVEVYPGFAASTINYDESGAVTGVNT
SDMGLDKQGEAKPNFEAGIELKAKYTVFAEGCRGHLGKELIQRFGLDDDKQPQHYALGLKEIWELPAGAKDQSGSVIHSA
GYPLSESNTTGGGFLYHMENNQIAVGLIVDLNYSNPYLSPFDEFQRFKHHPAIEKHLKGAQRIAYGARAIAKGGLSSLPK
QQFPGGLLIGCDAGTLNVAKIKGSNTAMKSGLLAAEAIIEAFTQTNPEPDYQSRFESSWLYEELSETRNFGANIHKFGSL
LGGTLSTFEHNIWQPLVKKPIPWTITDTSLDHEQLKPIDACQPIEYVKPDGIISFDKPSSVFLSGTQHEENQPCHLQLAY
PHIPIQVHLKKFDEPSQRYCPAGVYEVVEVEGKKLLQINAANCVHCKTCDIKDPSQNITWKAPEGGGGPSYQNM

Sequences:

>Translated_554_residues
MMERECMEFDVVIVGAGPAGLSAACRLAQLNQEREDEPLSICVVEKGSEVGAHILSGAVFETHALDELFPDWQSMGAPLS
VFVKNDAFLYLTTELNHVRVPHFLTPNPMLNDENNYVISLANLCRWLAEQAESLGVEVYPGFAASTINYDESGAVTGVNT
SDMGLDKQGEAKPNFEAGIELKAKYTVFAEGCRGHLGKELIQRFGLDDDKQPQHYALGLKEIWELPAGAKDQSGSVIHSA
GYPLSESNTTGGGFLYHMENNQIAVGLIVDLNYSNPYLSPFDEFQRFKHHPAIEKHLKGAQRIAYGARAIAKGGLSSLPK
QQFPGGLLIGCDAGTLNVAKIKGSNTAMKSGLLAAEAIIEAFTQTNPEPDYQSRFESSWLYEELSETRNFGANIHKFGSL
LGGTLSTFEHNIWQPLVKKPIPWTITDTSLDHEQLKPIDACQPIEYVKPDGIISFDKPSSVFLSGTQHEENQPCHLQLAY
PHIPIQVHLKKFDEPSQRYCPAGVYEVVEVEGKKLLQINAANCVHCKTCDIKDPSQNITWKAPEGGGGPSYQNM
>Mature_554_residues
MMERECMEFDVVIVGAGPAGLSAACRLAQLNQEREDEPLSICVVEKGSEVGAHILSGAVFETHALDELFPDWQSMGAPLS
VFVKNDAFLYLTTELNHVRVPHFLTPNPMLNDENNYVISLANLCRWLAEQAESLGVEVYPGFAASTINYDESGAVTGVNT
SDMGLDKQGEAKPNFEAGIELKAKYTVFAEGCRGHLGKELIQRFGLDDDKQPQHYALGLKEIWELPAGAKDQSGSVIHSA
GYPLSESNTTGGGFLYHMENNQIAVGLIVDLNYSNPYLSPFDEFQRFKHHPAIEKHLKGAQRIAYGARAIAKGGLSSLPK
QQFPGGLLIGCDAGTLNVAKIKGSNTAMKSGLLAAEAIIEAFTQTNPEPDYQSRFESSWLYEELSETRNFGANIHKFGSL
LGGTLSTFEHNIWQPLVKKPIPWTITDTSLDHEQLKPIDACQPIEYVKPDGIISFDKPSSVFLSGTQHEENQPCHLQLAY
PHIPIQVHLKKFDEPSQRYCPAGVYEVVEVEGKKLLQINAANCVHCKTCDIKDPSQNITWKAPEGGGGPSYQNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=565, Percent_Identity=50.6194690265487, Blast_Score=553, Evalue=1e-157,
Organism=Escherichia coli, GI87082155, Length=372, Percent_Identity=28.2258064516129, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1787991, Length=399, Percent_Identity=27.3182957393484, Blast_Score=112, Evalue=7e-26,
Organism=Escherichia coli, GI1786227, Length=334, Percent_Identity=26.0479041916168, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI25144720, Length=565, Percent_Identity=46.5486725663717, Blast_Score=506, Evalue=1e-143,
Organism=Saccharomyces cerevisiae, GI6324932, Length=580, Percent_Identity=43.7931034482759, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI24652256, Length=565, Percent_Identity=51.6814159292035, Blast_Score=540, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60836; Mature: 60836

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMERECMEFDVVIVGAGPAGLSAACRLAQLNQEREDEPLSICVVEKGSEVGAHILSGAVF
CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCHH
ETHALDELFPDWQSMGAPLSVFVKNDAFLYLTTELNHVRVPHFLTPNPMLNDENNYVISL
HHHHHHHHCCCHHHCCCCEEEEEECCEEEEEEECCCEEECCEEECCCCCCCCCCCEEEEH
ANLCRWLAEQAESLGVEVYPGFAASTINYDESGAVTGVNTSDMGLDKQGEAKPNFEAGIE
HHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEE
LKAKYTVFAEGCRGHLGKELIQRFGLDDDKQPQHYALGLKEIWELPAGAKDQSGSVIHSA
EEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCEEEEC
GYPLSESNTTGGGFLYHMENNQIAVGLIVDLNYSNPYLSPFDEFQRFKHHPAIEKHLKGA
CCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHH
QRIAYGARAIAKGGLSSLPKQQFPGGLLIGCDAGTLNVAKIKGSNTAMKSGLLAAEAIIE
HHHHHHHHHHHHCCHHHCCHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHH
AFTQTNPEPDYQSRFESSWLYEELSETRNFGANIHKFGSLLGGTLSTFEHNIWQPLVKKP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCC
IPWTITDTSLDHEQLKPIDACQPIEYVKPDGIISFDKPSSVFLSGTQHEENQPCHLQLAY
CCEEEECCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCEEEEEEC
PHIPIQVHLKKFDEPSQRYCPAGVYEVVEVEGKKLLQINAANCVHCKTCDIKDPSQNITW
CCCEEEEEEECCCCCHHHCCCCCHHHHEEECCCEEEEEECCCEEEEEECCCCCCCCCCEE
KAPEGGGGPSYQNM
ECCCCCCCCCCCCC
>Mature Secondary Structure
MMERECMEFDVVIVGAGPAGLSAACRLAQLNQEREDEPLSICVVEKGSEVGAHILSGAVF
CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCHH
ETHALDELFPDWQSMGAPLSVFVKNDAFLYLTTELNHVRVPHFLTPNPMLNDENNYVISL
HHHHHHHHCCCHHHCCCCEEEEEECCEEEEEEECCCEEECCEEECCCCCCCCCCCEEEEH
ANLCRWLAEQAESLGVEVYPGFAASTINYDESGAVTGVNTSDMGLDKQGEAKPNFEAGIE
HHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEE
LKAKYTVFAEGCRGHLGKELIQRFGLDDDKQPQHYALGLKEIWELPAGAKDQSGSVIHSA
EEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCEEEEC
GYPLSESNTTGGGFLYHMENNQIAVGLIVDLNYSNPYLSPFDEFQRFKHHPAIEKHLKGA
CCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHH
QRIAYGARAIAKGGLSSLPKQQFPGGLLIGCDAGTLNVAKIKGSNTAMKSGLLAAEAIIE
HHHHHHHHHHHHCCHHHCCHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHH
AFTQTNPEPDYQSRFESSWLYEELSETRNFGANIHKFGSLLGGTLSTFEHNIWQPLVKKP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCC
IPWTITDTSLDHEQLKPIDACQPIEYVKPDGIISFDKPSSVFLSGTQHEENQPCHLQLAY
CCEEEECCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCEEEEEEC
PHIPIQVHLKKFDEPSQRYCPAGVYEVVEVEGKKLLQINAANCVHCKTCDIKDPSQNITW
CCCEEEEEEECCCCCHHHCCCCCHHHHEEECCCEEEEEECCCEEEEEECCCCCCCCCCEE
KAPEGGGGPSYQNM
ECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]